Shewanella sp. Arc9-LZ: GUY17_05340
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Entry
GUY17_05340 CDS
T10509
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shea03021
]
GUY17_05340 (nusA)
03009 Ribosome biogenesis [BR:
shea03009
]
GUY17_05340 (nusA)
Transcription machinery [BR:
shea03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GUY17_05340 (nusA)
Ribosome biogenesis [BR:
shea03009
]
Prokaryotic type
rRNA transcription factors
GUY17_05340 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QHS12583
UniProt:
A0AAE6SS30
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All DBs
Position
1229230..1230729
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AA seq
499 aa
AA seq
DB search
MNKEILLVAEAVSNEKGLPREKIFEALEIALATATKKKYEGDIEVRVAIDRKTGHYDTFR
RWMVVDDKGEALENPYSEITFEAARYEEPEIQVGEFIEDQIDSVAFDRITTQTAKQVIVQ
KVREAERAQIVEQFIEREGEIVTGVVKKSTRESVVVDLGNNADGVLFKEDLISRESFRPG
DRVRALLYSVRPEARGAQLFLTRSKSEMLIELFRVEVPEIYDELIEVMGAARDPGARAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQYVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWELNVMTVEDMNKKHQAESAKVI
DLFVAYLDVDKDFAAVLADEGFTSLEEIAYVPESELLAVEGFDEGIVEALRERAKAAIST
RALASEEALDGAEPSDDLLALEGLERHLAYVLASKGVVTLEDLAEQGIDDLIDIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagatcctgctagtcgcagaagcggtttccaatgagaaaggccttccgcgc
gagaaaattttcgaagcgctagaaattgcactggctaccgcaacaaagaaaaaatatgaa
ggcgatatcgaagttcgcgttgctattgatcgtaaaacaggccattacgacactttccgt
cgttggatggtagttgacgataaaggcgaagctttggaaaatccatacagcgaaattacg
tttgaagccgctcgttatgaagaaccagagattcaagtgggtgagtttattgaagatcaa
atcgactcagttgcatttgaccgtatcaccacacaaaccgcgaaacaagttatcgtacaa
aaagtacgtgaagctgaacgtgcacaaattgttgaacaatttattgaacgtgaaggtgag
attgttactggtgttgttaagaaaagcacccgtgaaagcgtagttgttgatttaggtaac
aatgctgatggcgtgttatttaaagaagatttaatcagccgtgaatctttccgtcctggt
gaccgtgtgcgtgcattattgtactctgtacgtccagaggcacgtggtgcgcagttattt
ttaacccgcagtaaatctgaaatgttaattgaactgtttcgggttgaagtaccagaaatt
tacgacgaattaatcgaagtaatgggtgccgctcgtgatccaggcgctcgtgctaaaatc
gctgtgaaatcaaatgatcgtcgcattgaccctattggtgcttgtgttggtatgcgtggc
gcacgtgtacaagccgtatcaaacgaattaggtggcgagcgagtcgatatcgtgttgtgg
gatgataatcctgcacaatatgtgatcaatgccatggcgccagctgatgttgcatctatc
attgtggatgaagacaaccactcgatggatattgctgtagaagctgacagtttggcacag
gctattggtcgtaatggccaaaacgtacgtttagccactcaacttactggttgggaacta
aacgtaatgacagttgaagacatgaacaaaaaacaccaagccgaaagtgcaaaagtgatt
gatttgtttgtagcttatctggatgtagataaagattttgcagccgtattggctgatgag
ggattcacttcgctagaagagattgcttatgtcccagaatctgaactattagcagtagaa
ggtttcgacgaaggaatcgttgaagcattacgtgaacgtgcaaaggcggcaatctctaca
agagcattagcgtcggaagaagcgttagatggtgcagagccaagtgatgatttactagca
ttggaaggattagaaagacatttagcttatgttcttgcgagcaaaggcgtagtgacttta
gaagacttggccgagcaaggtattgacgatttaattgatattgaagaattaacagaagaa
aaagcaggcgagctcatcatggctgcccgcaatatctgttggtttggcgaagaagcataa
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