Shewanella sp. Arc9-LZ: GUY17_05440
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Entry
GUY17_05440 CDS
T10509
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_05440 (radA)
DNA repair and recombination proteins [BR:
shea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GUY17_05440 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
Lon_C
DUF7125
nSTAND3
SLFN-g3_helicase
AAA
AAA_16
AAA_18
ABC_tran
ATPase_2
NPHP3_N
AAA_14
cobW
AAA_19
DUF5906
AAA_30
MMR_HSR1
AAA_11
Rad51
Thymidylate_kin
TsaE
CobU
NACHT
NTPase_1
ATP-synt_ab
Zeta_toxin
nSTAND_NTPase5
AAA_28
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
QHS12603
LinkDB
All DBs
Position
1257916..1259295
Genome browser
AA seq
459 aa
AA seq
DB search
MAKAPKMAFVCDDCGLDYPRWQGQCRCGAWNSLVEMKLSASKSSTSRSSVLGYAGAVGGG
SKKLSEVESQDAEKRLTEIGELDRVLSGGLTTGSVNIISGDPGAGKTTLLSDLVARMSQS
MASLYCTAEESLSQFKNRVNRLKLNYNEDNLFLLSETSVEAIIEELEAKQIKFAVIDSIQ
AVVTDAANGSPGSPSQVKTAAQAFTQYCKKNNVTMFIIAHVNKNNEIAGPQTLVHIVDSL
LHIDTNDGQIRTLRANKNRFGDVDTVGIFRMSERGMISVDNPSEIFLSGSTTESPGSTIT
CIRKGNRNLLLEIQCLTTETESEFPQRVCVGLNMNRIKMLTGILRKHTKTKIFHDTFFNI
VGGLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAA
QHGFTEIFIPFRNYHKTMEGLGAKIIPVKTIHELLELIN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagctccaaaaatggcatttgtttgtgacgattgtggcctggattatccgcgt
tggcagggacagtgtcgttgtggtgcgtggaattctttggtggaaatgaaactgtcggcc
tcaaagagttcaacttcacgttcatcggtattgggatacgctggtgctgtgggggggggc
tctaaaaaactcagtgaagttgaatcacaagatgccgaaaaaagactgactgaaatcggt
gaattagatagagtgctcagtggtggtttaacgacgggatcggtgaatattatttccggt
gacccaggagctggtaaaacaacattactgtctgatttggtcgctcggatgtcacaatct
atggcttcactgtactgtactgcagaagaatcattatctcagttcaaaaaccgtgttaat
cgtttaaagcttaattataacgaagataacttgtttctgctgtctgaaaccagtgtagaa
gccattattgaagaattagaagccaagcaaatcaagtttgctgtcattgactctattcaa
gcggttgtcactgatgcggccaatggcagtccggggtcgccttcacaagttaaaacggcg
gctcaagcatttactcaatattgtaaaaaaaataatgtcaccatgttcattattgctcac
gtaaataaaaataacgaaatagcaggcccgcaaaccttggttcatatcgtagattcattg
ctacatatcgacaccaacgacgggcaaattcgtaccttgcgcgccaataaaaaccgtttt
ggtgatgttgataccgtggggatattccgcatgagtgaacgcggtatgatcagtgttgat
aacccaagtgaaatatttttatcgggttcaaccaccgaatcgccgggctcgaccatcact
tgtattcgtaaaggtaaccgtaatttactattggaaatacaatgtttaaccaccgagact
gaatctgagtttccacaacgagtgtgtgtgggcttaaacatgaatcggattaaaatgtta
accggtattttacgtaagcatactaaaaccaaaatttttcatgatacattttttaatata
gtgggcggtttaaaaattgatgagtcagaaacctgcatcgatctagcgcttgttacggca
ttactgagcagtttaaatgactttgtcgtgccaagaaccacttgtattatgggcgagttg
agtttgaatggcgatgtgcgcccaattgatagtggtgtgccgagagtcaaagaagctgca
caacatggttttacagagatttttatcccatttcgtaattatcacaaaaccatggaaggg
cttggggcaaaaattattccagtgaaaactatccatgagctgcttgagttaattaattaa
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