Shewanella sp. Arc9-LZ: GUY17_06125
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Entry
GUY17_06125 CDS
T10509
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shea02000
]
GUY17_06125 (bamB)
Transporters [BR:
shea02000
]
Other transporters
Pores ion channels [TC:
1
]
GUY17_06125 (bamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
DUF6906
Polyoma_coat2
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-ProteinID:
QHS12726
LinkDB
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Position
1419695..1420930
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AA seq
411 aa
AA seq
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MKSWCKNLLAVGLSVALMSACSSSDVEEEPVSELVDIQATVFPEITWDTSVGDGVGDYYS
QLRPTVRYGKVFVADRSGIVVAFDETTGDELWKKDFNDVFEDKLETKTKGILLAAGVTAA
RNKVFVGGETGLLVALDEATGDVVWSAQANGELLSAPTVAEDVVAVNTSKGAFEAFDIDN
GKKLWTYEMQLPNLTLRGTGSAAYEAGGFFLGTADGKVAVVVKSNGQAAWEQAVFSPTGA
NEFTRMADIDMTPLILGENLYVASYNGNLVSMELRSGRVVWSRKYSSFNDLAAAGISLYL
VDDHSRIYSVDRRNGLELWSTSVLKNRELTAPAVIDNYIVVGDFEGYLHFIDRNSGDIVG
RVQVDSDGLYAQPLVVGDKIYVQGRSGKVAIVTLNKEEQMNVEEDTETDAE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgtggtgtaaaaatctacttgccgttgggttaagtgttgctcttatgtctgct
tgttcttcaagtgatgttgaagaagagccagtgagtgaattagttgatatacaagcaacc
gtgtttcctgagattacttgggataccagtgtcggcgacggtgtaggggattattactct
caacttcgtcctactgttcgttacggcaaggtgtttgtcgccgatcgtagcggtattgtg
gttgcctttgatgaaacaaccggtgatgagctttggaaaaaagacttcaatgatgtcttt
gaagataagcttgaaaccaaaaccaagggtattcttttagctgcaggtgttaccgctgca
cgtaataaagtgtttgttggtggcgaaaccggtttattggttgcgcttgacgaagcaacg
ggtgacgttgtgtggtctgcgcaagcaaatggcgagttattatcggcaccaacagtggca
gaagatgttgtcgcggtaaataccagtaaaggcgcatttgaagcatttgatatcgataac
ggtaaaaagttatggacctatgaaatgcaactgccaaatcttaccttaagaggtacaggt
tctgctgcgtatgaagcgggcggtttctttttgggaacagctgacggtaaagtcgcagtt
gtcgttaaaagtaatggccaagctgcttgggaacaagccgtttttagtccaaccggtgca
aatgagtttacccggatggctgatattgatatgacgccattaatactgggcgaaaatctg
tatgttgctagttacaatggtaacttagtctctatggaacttcgtagcggtcgcgtagtt
tggtcgcgtaaatattcaagctttaatgatttagccgctgcaggtattagcctgtatttg
gtcgatgatcatagccgtatttactctgtcgatcgccgtaatggtttagagttatggagc
acttcagtccttaaaaaccgtgagttaacagcccctgcagtaattgataattatattgtt
gtcggtgactttgaaggttacttgcattttattgaccgtaacagcggcgatatagttggc
cgagttcaagttgatagtgatggattatatgcccaacctttagtggtgggtgacaaaatc
tatgttcaaggccgtagcggcaaagtcgcgattgttacgttgaacaaagaagagcaaatg
aatgttgaggaagatactgaaactgatgcggaataa
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