Shewanella sp. Arc9-LZ: GUY17_06645
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Entry
GUY17_06645 CDS
T10509
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shea03009
]
GUY17_06645
Enzymes [BR:
shea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GUY17_06645
Ribosome biogenesis [BR:
shea03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GUY17_06645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Ubie_methyltran
Methyltransf_31
Methyltransf_25
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QHS12821
LinkDB
All DBs
Position
complement(1534925..1536301)
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AA seq
458 aa
AA seq
DB search
MSHNIPAMSNATTSDETHAQEIAATTPAQKRALSYSTTIETLFNQVMSTNMPADRIIGQY
FREHKKHGSKDRRVIRESLFGLFRWWGWLKQLNSSQKHTTWFQQLSTCAMLEQHEWNDVT
TAWNDFASWPQTRPDQVELINTPSLNDKLTAFINVSGIDTCQLTQLLPQWFWQLCPIDDV
NQYAVVNAMSSRPPIWARAQTLSTEKVIESLRQAGVEAKANSYFSDAINLGHKSINLNEI
NVYKQGYLEIQDLASQVIGQICQPSNHEKWWDACSGAGGKTLQLYSLMLQQSSALTGSII
ASDIRTKPLEELRKRAKRAGFDNISVAPWKGEVLPVDANTFDGVLVDAPCSCTGTWRRNP
DMRWLDDASAVTDKPMLQLAILRRSAVAVKVGGKLVYATCSLSPSENEQIVKDFLSETAE
FELEPVIHPFTGQPCNMLTIWPQQANSDGMFVAKMRRK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataatattcccgccatgtctaacgcaaccacatcagacgagacacatgcgcaa
gaaatagctgcgacgacaccagcacaaaagcgagccctaagttattcaaccactattgag
acactgtttaatcaggttatgagtaccaacatgcctgccgatcgaatcattggccaatat
tttcgtgaacataaaaaacatgggtcaaaagataggcgagtgatccgcgaaagtttgttt
ggtctatttcgctggtggggctggttaaagcaattaaattcaagccaaaaacacactaca
tggtttcaacagctaagcacatgcgcgatgttggaacaacatgaatggaatgacgttact
actgcctggaatgacttcgcaagttggcctcaaacccgcccggaccaggttgaactgata
aataccccttcattaaatgacaaattaaccgcctttattaatgtaagtggcattgatacc
tgtcaactaacccagttgttaccacaatggttttggcaactttgccctattgatgatgtt
aatcaatatgctgttgttaatgcaatgagcagtcgacctccgatctgggctcgtgcacaa
acattatcaacagaaaaagtgatcgaatctcttcgacaagcgggcgttgaagcaaaagcg
aatagttacttttctgatgccataaatttaggtcataaaagcattaatctaaatgaaata
aatgtttataaacaaggttatcttgaaatccaagatttagcctcgcaagtaattggtcaa
atttgtcaaccaagtaaccatgaaaaatggtgggatgcttgtagtggtgctggcggcaaa
acactgcaattatattcattaatgttgcagcaaagctctgccttaacgggcagtattatt
gcatctgatattcgaactaaaccgttggaagagctacgcaaacgtgccaaacgtgcaggt
tttgataatattagtgttgcaccttggaaaggcgaggtattgcccgtagatgcgaatacc
tttgacggagtgttagtcgatgcaccctgtagctgcacaggtacttggcgtagaaatcca
gatatgcgatggcttgatgatgccagtgcagtaacagataaaccgatgctacagctagcc
attttacgacgcagcgcagtggcagtaaaagtaggcggtaaattggtttatgctacgtgc
tctttatcacctagtgaaaatgaacaaattgtaaaagactttttatcagaaacagccgag
tttgaacttgaaccggtcatccatccttttactgggcaaccgtgtaatatgctgacaatt
tggcctcagcaagccaatagtgatggcatgtttgtcgcaaaaatgcgccgcaaatag
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