Shewanella sp. Arc9-LZ: GUY17_07435
Help
Entry
GUY17_07435 CDS
T10509
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GUY17_07435 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_07435 (recD)
Enzymes [BR:
shea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GUY17_07435 (recD)
DNA repair and recombination proteins [BR:
shea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUY17_07435 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
AAA_16
UvrD_C
SLFN-g3_helicase
nSTAND3
AAA_25
DEAD
AAA_24
AAA_12
T2SSE
TraI_hel_assoc_N
FtsK_SpoIIIE
NTPase_1
SRP54
AAA_28
MeaB
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QHS12961
UniProt:
A0AAE6SRL8
LinkDB
All DBs
Position
complement(1723682..1725745)
Genome browser
AA seq
687 aa
AA seq
DB search
MLILTHPITELLHLWQEQRLITALDRHFALELASIETINNDPAISEQQPQLFLLVCAMLS
QQLSNQHSCLVIEQIDLANPMAEDNRGNAEINCRIELNHQQLIEQIALFDAVGQPGDNKP
MIFEHGRLYLNKYHFFETQVAAKLTQLANQQIEIDLANSNLPQLIECLFTAEDSNSSPFN
WQKIATATALAKALAVITGGPGTGKTTTVTKLLLLLLTQSPLTIRLVAPTGKAAARLSES
IKASKHRLLQQLTQVSDPALAKVLTDSLKQIPEEASTLHRLLGVIPNSYQFRHHQDNPLR
LDLLVVDEASMVDLPMMYKLLSALPSHGRLILLGDQDQLASVEAGAVLADICVGLKQANQ
HEASPWSMRYSAAQAKLIEQLTQQDVSQFIHQQPKIGDSLCMLMHSHRFKGDAGIGLLAN
AVNQSNVHAIRQVWQHDHAELNWFEHQHNAQGDNTGKQALLVLSVQAYGEYLSLVQENQQ
RINQQTIIDQADRQDSAITLPHSEQTIIDSFNQYRVLCAMRAGEFGVEGMNIAITDSLKH
AKLINPQNEFYLGRPIIIQSNDYNLGLFNGDIGLILQDSTKPSRLMAHFVMADGSLLKVL
PARLPSHDTCYAMTVHKSQGSEFDKVSFVLPHKPSSAQWQLLSKELLYTAITRAKNHFYC
LGTSMIFEKASKQATSRASGLAWRLWG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgctaatactcacccatccaatcactgagttattgcacctttggcaagaacagcggctc
attacagcactcgatcgtcattttgctttagagctggccagtattgaaaccatcaataac
gatcccgcaataagcgaacaacagccgcaactgttcttgcttgtttgcgccatgcttagc
cagcaattgtcgaatcagcacagttgtttagtcatcgagcaaattgatttagccaatccc
atggcagaagacaaccgcggcaacgctgaaatcaattgtcggattgagcttaaccatcaa
caattaattgaacaaatcgcgctatttgatgccgtcggccagcctggtgacaataaaccg
atgatttttgaacatggacgcttatatttaaataagtaccacttctttgaaactcaagtg
gcggctaagttgacccaattagccaatcaacagattgaaatcgacctagctaacagtaat
ctgccgcaactcattgaatgtttatttaccgcagaagacagcaatagcagcccgtttaac
tggcaaaaaatagccactgcaacagcgttggccaaagcattagcggtgatcaccggcggc
ccaggaaccggtaaaaccaccacagtaactaaactattattgttactgttaacccaatcg
ccgctaaccatccgtttagtcgcgcccacaggtaaagctgcagcaaggctgagtgaatcg
atcaaggcgtctaaacatcgtttactgcaacagctaacccaagtgagcgaccctgcattg
gcgaaagtattaactgattcgctaaaacaaatacctgaagaagcctcaacattgcatcga
ttattgggggttatcccaaactcgtatcaatttaggcatcatcaggataatccgttgcgc
ttagatttactggtggttgatgaagcatcgatggtcgacttacccatgatgtataaatta
ctcagcgccctgccgtctcatggccgtttgatattgttaggcgaccaagatcaactcgca
tcagtagaagctggcgcagtgctggcggatatttgtgttggcttaaaacaagctaatcag
catgaggcatcgccatggtcaatgcgttacagcgcagcacaggcaaagctcattgagcaa
ttaacccaacaagatgtcagtcagtttattcatcaacagcctaaaattggtgacagtttg
tgtatgttgatgcacagccatcgttttaaaggcgatgccggtattgggttattagccaat
gcggttaatcaatcaaatgtgcatgcgattcgtcaagtatggcaacatgatcatgccgaa
ttgaattggtttgaacatcagcataatgcccagggagataacacaggtaaacaagcgtta
ctggtattatcggtacaggcttatggtgagtatctaagtttggtacaagaaaatcagcaa
aggataaatcaacagaccattatcgatcaagcggatcgacaggacagcgccataacattg
ccgcattctgaacaaaccatcatcgacagctttaaccaatatcgagtcttgtgtgccatg
cgtgctggagagtttggggttgagggcatgaacatcgccatcaccgacagccttaaacac
gccaaactgattaatcctcaaaatgagttctatttaggtcgacccatcattattcaaagt
aacgattacaacttaggcttatttaatggcgacattggtttaatcttgcaagacagcact
aagccaagtcgcttaatggcccactttgttatggccgatggcagcctgcttaaagtatta
cccgcacgcttaccaagccacgacacttgctacgccatgacagtacacaaaagccaaggc
agcgagtttgataaagtcagctttgtattgccacataaacccagctccgcccaatggcag
ctactcagtaaagaactgctttacaccgccatcacccgcgctaaaaaccatttttattgt
ttaggcacgagcatgatatttgaaaaagccagcaaacaagccacatcgcgcgcatcgggg
ctagcttggagattgtggggctga
DBGET
integrated database retrieval system
