Shewanella sp. Arc9-LZ: GUY17_07440
Help
Entry
GUY17_07440 CDS
T10509
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GUY17_07440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_07440
Enzymes [BR:
shea01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GUY17_07440
DNA repair and recombination proteins [BR:
shea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GUY17_07440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
AAA_25
AAA_30
ResIII
DUF7134
Motif
Other DBs
NCBI-ProteinID:
QHS12962
UniProt:
A0AAE6SRM2
LinkDB
All DBs
Position
complement(1725739..1729602)
Genome browser
AA seq
1287 aa
AA seq
DB search
MDAITVTPLNALTLPFSGSSLIEASAGTGKTYTISGLYLRLLLGHGGKAPLSCEQILVVT
FTNAATEELRDRIRKRINLAFKRFLGLAVNDEFIEQLYQDISEDERPIALRRLDLALKSL
DEAAIFTIHAFCQRVLSDMAFESSLLFESEFTLDDSEFLHHAVRDFWREVCYPLPPFLAQ
AISDVFAEPDVLAQKLRPLLGASQAVLSKQPLAFETLQQQLSQSISRFTLLWQSLHDSTL
ELLQSLPLNGQRFGKGADGYPKLSQLFDSISNWVKFGQGLPPIKALEQLALSELKLNKGG
VIPSAAEAPLLEHIERLLELINQLIPSFLVRAREGIRQRFAGQKQQRNLMTPDDLLLSLA
MALSQNPITLAHAIAKRFPVALIDEFQDTDPLQFTIFNQVYQQPLASQLDLAADTTVHSQ
NDDSKSNDDIGNDNNDDDANKGRLSLLMIGDPKQAIYAFRGADIYTYIAARQQTQAHYNL
DTNYRSSTQLVNGVNQLFSQHQDPFISQAIPYDIVKTPSSAANKHLSEATTNPAALRIRL
LAEDDVNGLNKTTARQRLAADAASEIKRLLTEAQQGLCRVNTSLEQEAKPLIAKDIAILV
RDRNEAAVMKAELSARKIGAVFLSRDSVFNTIEAREMAILLYALATPKNERAIRAALATE
LVGFNAQRIHQFNQDEEQRQQVLDQFTHWHQLWQQRGVMPALLNFASETKLIHRYLSQSV
TADINSVDKHNANAHRDSSNNDNSYSSNSDNSFNDADDDNAADLKASGERRLTDFRHLAE
LLQQKATELDGSSALINWYEQQLIGNNGGDEQQLRLESEQNLVQIVTIHKSKGLEYPVCF
VPFVSLARGNKKRPAPMMYHKNEQLIWDIDATDEGWEQLKQETLAEDLRLLYVALTRPVY
VCYLYIANQSRQLKAGISSQLHETGIGYLLGITDKKTDFALIQAKVNAIATLPAMSVECL
SNDVDDSVLADINDNNDILAAKKVTRVQSLAWRVGSYSGLVKHLPHERVAPGADDEDFTD
ELIQLQLQDELTSEPVLDRFTFERGANAGSFMHLVLELFDFTQADTELTPALTKAMKQYG
FDEALWQQPLMDWYQQILAAPLFIKPSSEDTSLILSQLGMKQKMVEMEFYLPISTLQASQ
LNHILQQHGYVAGLDFDTLKGMLKGFIDLTFEHQGQFYIADYKSNHLGDNYSDYTRSAMA
KAIDAHRYNLQYILYTLALHRYLSLRLPNYNYQQHIGGCYYLFLRGMHPEHPGAGVFYDK
PPQALIEQLDRLFSGNTDNRAPETSSC
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggacgctattaccgtgacaccgcttaatgccctcaccttaccttttagcggttccagc
ttaattgaagccagtgctggtacagggaaaacctatactatttccggtttgtatttacgt
ttattgttaggccatggtggtaaagcaccgttaagttgtgagcaaattttggtggtaacc
ttcaccaacgccgccaccgaagaactcagagaccgaattcgtaaacggattaacttagcg
tttaaacgctttttaggtttagccgtaaacgatgagtttattgaacagctttaccaagac
atctcggaagatgaacgtcctattgcgttaagacgcttagacttagcgttaaagtcgtta
gatgaagcggccatttttactattcacgccttttgccaacgcgtgttgtcagacatggca
tttgagtcgtcattgctatttgagtccgaatttaccctcgacgacagtgagtttttacac
catgcagtgcgcgatttctggcgtgaagtctgttatccattaccgccctttttagcccaa
gccattagtgatgtgtttgccgaacctgacgtgttagcgcaaaagctgcgaccgttatta
ggtgcaagccaagcggtgttgtcaaagcagcctctggcctttgaaaccctgcaacaacag
ctaagccaaagtatcagccgctttaccttattgtggcaaagcctgcacgacagcaccctt
gaattattgcaatcgctgccattaaacggtcaacgatttggtaaaggcgccgacggctac
cctaaacttagccaactgtttgatagcattagtaactgggtgaaattcggtcaaggatta
ccgccaataaaagcgctggagcaattggcattatcagagcttaaactcaataaagggggc
gttatccccagtgctgctgaagcgccgttacttgagcatattgagcgcttacttgagttg
attaatcagcttattccgtcatttttagtgcgcgcccgtgagggaattcgccaacgcttt
gctggccaaaaacagcaacgcaatttaatgacacccgatgacctattgctcagcttagcc
atggcgctcagccaaaatccaatcaccctagcccatgctattgctaagcgttttccggtc
gcattaattgatgagttccaagacaccgatccactgcaattcaccatttttaatcaggtg
tatcaacagccgttagcatcacagctggacttagccgctgataccactgtgcacagccaa
aatgatgacagtaaaagtaatgacgacattggtaatgacaacaacgatgatgatgctaac
aaggggcgcttaagtttattaatgattggcgatcctaagcaggctatttatgctttccgt
ggcgccgatatttacacttatattgccgcgcgccaacaaacacaggcccattataatctt
gacaccaattaccgctcatcgactcaattggtcaatggtgttaatcagcttttcagccaa
caccaagacccgtttattagccaagctatcccctatgatattgttaaaaccccatcatcg
gcagccaataaacacctgagtgaagccacaaccaatccagcggcgttgcggatccgctta
ttagccgaagacgatgtaaatggcttaaacaaaactaccgcaagacaacgcctagcagct
gatgctgccagtgaaataaagcgcttactcaccgaagcgcaacagggattatgccgagtt
aataccagccttgaacaggaagctaaaccgctcattgccaaagacattgccatattggtg
cgcgaccgtaacgaagcggccgtgatgaaagcggaattatcagcacgtaaaattggtgcg
gtatttttaagccgagacagtgtatttaacaccattgaagcccgtgaaatggctatttta
ttgtatgccttagccacgcctaaaaatgaacgtgctatccgcgccgcgctggccactgag
cttgttggttttaatgcccagcggatccatcaatttaaccaagatgaagaacaacgtcag
caggtattagatcaattcactcattggcatcagttgtggcaacaacgcggcgttatgcct
gcgctgcttaactttgccagcgaaactaaactgatccatcgttatctgtcgcaatctgtc
acggctgacatcaatagtgttgataaacataacgctaatgctcaccgtgatagcagcaat
aatgacaacagttatagcagcaatagtgacaacagctttaatgatgctgatgacgacaac
gcagcagatcttaaagcctcaggagaaagacgcttaaccgactttaggcatttagccgaa
ttactgcagcaaaaggccactgagctagatggtagcagcgcccttatcaattggtacgaa
caacaactgattggtaacaatggcggtgatgagcagcaattgcgcttagaaagcgaacag
aacttggtgcaaattgtcactattcataaaagtaagggcttagaatatccggtctgtttt
gtgccgtttgtcagcttagcccgcggcaataaaaaacgccctgcgccgatgatgtaccat
aaaaatgagcagctcatttgggatatcgacgccaccgacgaaggctgggaacaactcaaa
caagaaaccctcgctgaagatttacgcttactgtatgtagcgttaacacggccggtttac
gtgtgttatttgtatattgccaaccaaagccgccaattaaaggcggggatcagcagtcaa
ttgcatgaaacaggtatcggttatctgttgggtattaccgacaagaaaaccgactttgct
cttattcaagccaaagtgaatgccattgccaccttaccagcgatgagtgtggaatgttta
agtaatgatgttgacgattcagtgctcgccgatattaacgacaataatgacattctagcg
gccaaaaaagtcactcgagtacagagccttgcgtggcgagtgggcagttattctggcttg
gtgaaacatctgcctcacgagagagtcgcacccggtgccgacgatgaagacttcaccgat
gagttaatccaattacagttacaagatgaactcaccagcgaacccgtacttgatcgcttt
accttcgagcgcggtgccaatgccggtagttttatgcatttagtgttagaactgtttgat
tttacccaagcagatactgaactgacgcctgcgctaacaaaagccatgaaacaatatggg
tttgacgaagccctatggcaacaaccgctaatggactggtatcagcaaatattggccgcg
ccgctgtttatcaagccatcgtcagaggacacatcactgatattaagccaattaggcatg
aagcaaaaaatggtcgaaatggagttttacttgcctatttcaaccttacaagcatcgcaa
ttaaatcatattttgcagcagcacggttatgtcgccggactcgactttgataccttaaaa
ggcatgttaaaaggctttatcgatttaacctttgagcaccagggccaattttatattgcc
gattataagtctaaccatttgggcgataactatagcgactacactcgctcagccatggct
aaagccattgatgctcatcgctataatttacaatacatcttgtataccttggcgttgcat
cgttacttatcgcttagattaccaaactacaattatcagcaacatattggcggctgctat
tacctgtttttacgcggcatgcatcctgagcatcctggcgcgggggtgttttatgacaaa
ccaccgcaagcattaatcgaacaactcgaccgcttattttcaggtaatacagacaatcgt
gcgccggagacgtcatcatgctaa
DBGET
integrated database retrieval system
