KEGG   Shewanella sp. Arc9-LZ: GUY17_09540
Entry
GUY17_09540       CDS       T10509                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shea  Shewanella sp. Arc9-LZ
Pathway
shea03030  DNA replication
shea03430  Mismatch repair
shea03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GUY17_09540
   03430 Mismatch repair
    GUY17_09540
   03440 Homologous recombination
    GUY17_09540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shea03032]
    GUY17_09540
   03400 DNA repair and recombination proteins [BR:shea03400]
    GUY17_09540
Enzymes [BR:shea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GUY17_09540
DNA replication proteins [BR:shea03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     GUY17_09540
DNA repair and recombination proteins [BR:shea03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     GUY17_09540
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QHS13342
LinkDB
Position
complement(2202735..2203451)
AA seq 238 aa
MTNFSDQEILNWQAFLELKANNSKDKRLHDFYHAGTYHNETPLSDIEFVALDFETTGLDS
QQNSIISIGLVPFNLQRIFCSKAKKWYLNPIDKLQENSIIIHGITHSDLQGAPDLLLILE
QLLNELAGKVVVVHYRHIERDFLDHTLRMLINEGIVFPVIDTMQIEANVQRAKSQGLLNL
FKRKRTESIRLANSRERYHLPAYAPHDALTDAIATAELLQAQIKYHFSPDTAIDKLWL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgactaatttcagcgaccaggaaattttaaactggcaagcctttctagaattaaaagcc
aataacagtaaagataaacgcctgcatgatttttatcatgcaggtacttatcacaatgaa
acaccattaagtgatattgagtttgtcgcattggattttgaaactaccggtttagattca
cagcaaaacagcatcattagtattgggctagtgccatttaatttacagcgaattttttgt
agtaaagcaaaaaaatggtatctcaaccctatagataaattacaagaaaactcaattatt
attcacggtattacccactcagatttacaaggtgcgccagatttgttgttgattttggaa
cagcttttaaatgaattggcaggaaaagttgtggtggtgcattatcggcatattgagcgt
gattttcttgaccacactttacgcatgttgattaatgaaggtattgtgtttccggttatc
gataccatgcagattgaggctaatgtgcaacgggcgaagtcacaagggttgcttaattta
tttaaaagaaagcgcacagaatcaattcggcttgccaatagccgtgaacgttatcactta
cctgcttatgcaccccatgatgcgttaactgatgcaattgccaccgcagagttactgcag
gctcaaattaaatatcattttagtccagacactgcgattgacaaattatggttgtaa

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