Shewanella sp. Arc9-LZ: GUY17_11775
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Entry
GUY17_11775 CDS
T10509
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00730
Thiamine metabolism
shea01100
Metabolic pathways
shea01240
Biosynthesis of cofactors
Module
shea_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
GUY17_11775 (thiC)
Enzymes [BR:
shea01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
GUY17_11775 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QHS13745
LinkDB
All DBs
Position
complement(2748907..2750907)
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AA seq
666 aa
AA seq
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MSNPNRRQTRANAQQFIDTLKPLQHPNSEKVYLTGSRADINVAMRQVNQTETVIGGTDAK
PIKQANPPIMVYDCAGAYSDPLADINVREGLPKIRQAWIDERQDTEQLTGASSGFTQQRL
ADDGLDHLRFDALVAPKRAKSGKCVTQMYYARQGIITPEMEYIAIRENMARAEVTDTVLT
QKAPGEAFGAHIGQLITPEFVRDEVARGRAIIPLNINHPETEPMIIGRNFLVKVNANIGN
SAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWLIRNSPVPIGTVPIYQALEK
VNGVAEDLSWAVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKW
CLSHHQESFLYEHFRDICQICAQYDVSLSLGDGMRPGSIADANDEAQFAELETLGELVKI
AWEYDVQTIIEGPGHVPMQLIKVNMEKQLALCDEAPFYTLGPQTTDIAPGYDHFTSGIGA
AMMAWYGVAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPGAQVRDNALSK
ARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITHEVREYAA
NLEQAEALKIEVSSASAYQAQHTAQAINPAEAMAQKSAEFKASGSALYHDVKSVAQVDTD
LTVEVE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatccaaaccgtcgtcaaactcgagctaacgctcaacaatttattgataccctt
aaaccgttacaacatcctaattctgaaaaagtctatttaacgggtagtcgagctgatatc
aacgtcgctatgcgtcaggttaatcaaactgaaaccgtgattggcggcaccgatgcaaaa
cccattaaacaagccaatccgcctattatggtctacgactgcgcgggtgcttattctgat
ccccttgctgatatcaatgtgcgtgaaggcttacctaaaatccgtcaagcatggattgat
gagcgacaagatacagagcaattaaccggtgcaagttcaggctttacccaacagcgacta
gccgatgatggactcgatcatttacgctttgatgcccttgtcgcgcctaaacgtgccaag
tcgggcaaatgcgtgacccaaatgtattatgcacgccaaggtattattacccctgaaatg
gaatacattgccattcgtgaaaacatggctcgtgctgaagtaaccgacaccgtattaacc
caaaaagcgcctggagaggcttttggtgcgcatattggtcagctgatcacacctgagttt
gtccgtgatgaagtcgctcgaggtcgagcgattattccgttgaatattaaccatcctgaa
accgaacctatgattattgggcgtaattttttggtgaaggtgaatgccaatattggtaat
tcagcggtgacatcttcgattgaagaagaagttgaaaaactggtgtggtcaacccgttgg
ggtgcagatacggtcatggacttgtcgaccgggcgttatattcatgaaacgcgtgagtgg
cttatccgtaattcgccagtgccaattggtaccgtgccgatttatcaagcattagaaaag
gttaatggcgttgccgaagacctcagttgggcagtatttagagatacattgattgaacaa
gccgagcagggcgtagattattttacgattcatgctggggtgttattgcgttatgtaccc
atgaccgctaaacgccttaccggcattgtgtcacgtggcggttcaattatggctaagtgg
tgtttaagccaccatcaagaaagctttttatatgaacattttcgtgatatttgccagatt
tgcgcccaatacgatgtgtcattgtcgttaggcgatggtatgcgccccggttcaattgcc
gatgccaatgatgaagcgcaatttgcggaattagaaaccttaggtgaattggtcaaaatt
gcatgggaatatgatgtgcaaaccatcatcgaaggccctggtcatgtgccaatgcaattg
attaaagtcaatatggaaaagcaattggccctttgtgacgaagcaccattttatacctta
ggcccacaaacaaccgatattgcgccgggctatgatcacttcacctctggtatcggcgct
gccatgatggcttggtacggcgtggcgatgttgtgttacgtcacccccaaagaacactta
ggtttgccaaataaagaagatgtaaaacaaggcttaattgcctacaagattgcagctcat
gctgctgatgtcgctaaaggtcatccaggtgcgcaagtacgtgataatgcgttatcaaaa
gcccgctttgaattccgttgggaagatcaatataacctaggtcttgatcctgataccgct
cgtgcttaccacgacgaatcgttaccacaagaatcggcaaaagtggctcacttttgttca
atgtgtgggcctaaattctgttcgatgaaaataacccacgaagtgcgtgaatatgccgcg
aatcttgaacaagctgaagcacttaagattgaagtatcttccgctagtgcttatcaagct
caacatacagctcaagccataaatccggcggaagcgatggcacaaaagtcggcagagttc
aaagcgtcgggatcggcgctttatcatgacgtcaaatctgtcgcacaagttgatactgac
ttaacggttgaggtggaataa
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