Shewanella sp. Arc9-LZ: GUY17_12890
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Entry
GUY17_12890 CDS
T10509
Symbol
fabF
Name
(GenBank) beta-ketoacyl-ACP synthase II
KO
K09458
3-oxoacyl-[acyl-carrier-protein] synthase II [EC:
2.3.1.179
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00061
Fatty acid biosynthesis
shea00780
Biotin metabolism
shea01100
Metabolic pathways
shea01212
Fatty acid metabolism
shea01240
Biosynthesis of cofactors
Module
shea_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GUY17_12890 (fabF)
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
GUY17_12890 (fabF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shea01004
]
GUY17_12890 (fabF)
Enzymes [BR:
shea01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.179 beta-ketoacyl-[acyl-carrier-protein] synthase II
GUY17_12890 (fabF)
Lipid biosynthesis proteins [BR:
shea01004
]
Fatty acid synthase
Component type
GUY17_12890 (fabF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Ketoacyl-synt_C
Thiolase_N
Motif
Other DBs
NCBI-ProteinID:
QHS13948
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Position
complement(3009639..3010877)
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AA seq
412 aa
AA seq
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MSKRRVVITGLGLVTPVGNDVESTWNALLAGKSGIAPITKFDSSEFGTRFSGSVKDFDVE
QYLTKKDARKMDLFIQYGMAAGIQAVKDSGLDMSQENPARIGTAIGSGMGGMWLIEQGHS
ALLNGGPRKVSPFFVPSTIINMIAGNLSIMYGMTGPNFAVTTACTTGVHNIGFAARTIAY
GDADVMVAGGAEDVTSPLGVAGFSAAKALSTRNDNPTAASRPWDKDRDGFVIGDGAGVIV
MEEYERAKARGAKIYGELVGFGMSGDAFHMTSPPSDGAGAAAAMVNAINDAQIDKELVGY
INAHGTSTHAGDKAEAAAVKSVFGPHAYEVLVSSTKSMTGHLLGAAGAVEAIITLLALRD
QHVPPTINLDNPDEGCDLDFVAHTSRRHQFDYALCNSFGFGGTNGSLLFKRI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaacgtcgtgtcgtcatcacaggtcttggtcttgtgactcctgtgggtaatgat
gtcgagtctacttggaatgccttattggctggtaagagtggtatagctccaatcacaaag
tttgattctagtgaatttggtactcgtttcagtggctctgtgaaagattttgacgtcgaa
caatacctaaccaaaaaagatgctcgtaaaatggatttatttatccaatacggcatggct
gcgggtattcaagcagtaaaagattcaggcttagatatgagccaagaaaatccagctcgt
ataggtactgctattggttctggtatgggtggtatgtggttaattgaacaaggccattct
gcattattaaatggtggaccacgtaaagtgtcgccattttttgtgccaagcaccattatc
aatatgatagccggaaacttgtcgattatgtatggcatgacaggtcctaattttgctgtg
actacagcctgtacaacgggtgtacacaatattggttttgcagcacgtaccattgcttac
ggtgatgctgatgtgatggtggctggtggcgcagaagatgttactagcccattaggcgtt
gcaggttttagtgctgctaaagcattatcgactcgtaatgacaatccaacagcagcaagt
cgcccttgggacaaagaccgtgatggctttgttattggcgatggcgccggtgttattgtg
atggaagagtatgaacgagctaaagctcgtggtgctaaaatttacggtgagttagttggt
tttggtatgagcggcgatgcatttcacatgacatcacctccaagtgatggtgctggtgcc
gcagcggcaatggttaacgccattaatgatgcccaaattgacaaagagcttgtgggttac
atcaatgcacatggcacctcaactcatgcgggtgataaagcagaagctgcagcagttaaa
tcggtgtttggaccacatgcctacgaggtacttgtaagttcaactaaatcaatgactgga
catttgttgggcgcagctggcgctgttgaagccattattactttgcttgcactgcgtgat
cagcacgtaccgccaacaatcaacttagataacccagacgaaggttgcgatttagatttt
gttgcccacacttcacgtcgtcatcagtttgactatgccttatgtaattcatttggtttt
ggtggcacgaacggttcgttactgtttaagagaatttaa
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