Shewanella sp. Arc9-LZ: GUY17_16390
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Entry
GUY17_16390 CDS
T10509
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GUY17_16390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_16390
Enzymes [BR:
shea01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GUY17_16390
DNA repair and recombination proteins [BR:
shea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GUY17_16390
Prokaryotic type
GUY17_16390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QHS14578
UniProt:
A0AAE6SVQ6
LinkDB
All DBs
Position
complement(3821898..3822560)
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AA seq
220 aa
AA seq
DB search
MTSHWQELFEQQQSQAYYQHLQHFIASQRADNKTVYPPDDEVFAAFDLTPLSEVKVVILG
QDPYHGPNQAHGLSFSVKNGIKPPPSLANIYKELTNDIKGFVTPEHGNLTSWAKQGVLLL
NTVLTVEQGLAHSHAKSGWETFTNNVLQRLNQQSSPIIFVCWGNHAIKKGRLITAAHHHV
LNGPHPSPLSAYRGFFGCGHFSSINQLLIEQGNPAINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgacttcccattggcaagagctgtttgagcaacaacaatcgcaggcatattatcaacat
ttgcaacactttatagcctcacaaagagccgataataaaaccgtttatccgcctgatgat
gaagtattcgcggcttttgatttaacaccgctgtcagaggttaaagtcgtgatactgggg
caagacccttaccatggacctaatcaagctcatgggctttctttttcggttaaaaatggc
attaaaccgccaccatcactagcgaatatctataaagaattaaccaatgatattaaaggc
tttgtgactcccgaacatggcaatttaacctcttgggctaagcaaggcgttttattattg
aatacggtattaacggtagagcaggggttggctcattcacatgctaaatctggctgggag
acatttactaataatgtattgcagcgattaaaccaacaatcttcgccgattatatttgtg
tgttggggaaatcatgctatcaagaaaggccgtctgattacggcagcacatcatcatgta
ttgaacggcccacatccatcgccattatctgcttaccgaggtttttttggttgcggtcac
ttttcaagtattaatcaattattaattgaacaaggcaatccagccataaattggcaagtt
tga
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