Shewanella sp. Arc9-LZ: GUY17_18065
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Entry
GUY17_18065 CDS
T10509
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea03420
Nucleotide excision repair
shea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GUY17_18065 (uvrD)
03430 Mismatch repair
GUY17_18065 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shea03400
]
GUY17_18065 (uvrD)
Enzymes [BR:
shea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GUY17_18065 (uvrD)
DNA repair and recombination proteins [BR:
shea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GUY17_18065 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GUY17_18065 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QHS14872
LinkDB
All DBs
Position
complement(4191107..4193290)
Genome browser
AA seq
727 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVGAPLSNMLVLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAV
TFTNKAAAEMRERVEKVVGTNMGRMWIGTFHGLAHRLLRTHYQDANLPQSFQIIDSDDQL
RLLKRILKSLNLDEKQYPPRQAQGYINGKKDQGLRPKHIDAGGFPIEQNLLNIYKVYQES
CDRAGLVDFAEILLRAHELWLNKPHLLAHYQERFRHILVDEFQDTNAIQYAWIRVLAGNT
ANVMIVGDDDQSIYGWRGAQIENLHRFLKDFSGATTIRLEQNYRSTANILNASNAVIANN
PDRLGKELWTEDKDGEPISVYCAFNEMDEAKFIVGRISDWHEKGGSLSECAILYRSNAQS
RVLEEAFLHKGLAYRIYGGLRFFERQEIKDAMGYMRLINNQNDDAAFERVVNTPARGIGD
RTLDIIRSTARQHELTLWQACVSLIEEKVLAGRAANAINGFMELIIAMRTDTADMLLYRM
ADDVIDRSGLRTMYEAEKGEKAQARIENLNELVTAARSFEMPEELEDMGELNAFLSHAAL
EAGEGQADAFTDAVQLMTLHSAKGLEFPMVFMAGVEEGLFPSKMALDEGDRLDEERRLCY
VGMTRAMQKLYISYAESRRIYGREDYASPSRFINEIPEKFVEQIRIRAQVKPSVSQRFPA
KATVATKKPHGFNDTGHKVGSKVKHFKFGEGVVTSFEGSGEKGRVQVEFVDFGSKWLLVS
LAKLERC
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcatcattattagacggcctaaacgataaacagcgtgaggcagtcggcgcg
ccactttcaaatatgttggtgttagcgggtgccggcagtggtaaaacccgtgtattaacc
catcgtattgcgtggttaatgcaagttgaacaacaaagtccatattctattttggcagtc
acctttaccaacaaagccgcggcagaaatgcgtgaacgggtggaaaaggttgtgggcact
aacatggggcggatgtggatcggtaccttccatggtttagcgcatcggttattgcgaacc
cattatcaagatgccaatttaccgcaaagtttccagattatcgattctgacgatcagtta
cgtttactgaaacgcattcttaaaagccttaatttagacgagaagcaatatcctcctcgt
caggcccaaggctatattaacggcaaaaaagaccaaggattacgtcctaagcatatcgat
gcgggcggttttccgattgaacaaaatttactgaatatttataaggtttaccaagagtct
tgcgatcgcgcaggtttggtcgactttgccgaaatcttactacgagctcatgaattatgg
ctcaataaaccgcatttactggcacattaccaagaacgcttccgtcatattttagtggat
gagtttcaagataccaacgcgattcaatatgcgtggatccgtgtgttagccggtaacaca
gccaatgtgatgattgtcggtgatgacgatcaatctatttacggttggcgtggtgcgcaa
attgaaaacttacatcgtttcttaaaagacttctcgggtgcaacaaccattcgtttagaa
caaaattatcgttcaacagcgaatattttgaatgcctctaacgctgtgattgccaataac
ccagatcgtttgggcaaagagttatggaccgaagataaagatggcgagcccatttcggtc
tattgcgcctttaatgaaatggatgaagccaaatttattgttggacgcattagcgactgg
catgaaaagggcggcagtttgagcgagtgcgccattttatatcgttcaaatgcacaatcg
cgagtattagaagaagcctttttacacaaagggttagcgtatcgtatttacggtggtctg
cgcttctttgagcgacaagaaattaaagatgctatgggctatatgcgtctgatcaataac
caaaatgatgatgcggcattcgagcgcgtggtgaatacgccagctcgtggtatcggcgat
cgtactttggatattatccgctcaaccgctagacagcatgaactgacgctgtggcaagct
tgcgtgagtttaatcgaagagaaagtccttgccgggcgtgcggctaatgccatcaatggc
tttatggaactgattattgcgatgcgaacggatacggcagatatgttgctgtaccggatg
gctgatgatgtgattgaccgttcaggcttgcgtaccatgtacgaggccgaaaaaggcgag
aaagcccaagctcgaattgaaaacttaaacgagttggttactgctgcgcgcagttttgaa
atgcctgaagagcttgaagacatgggcgaacttaatgcctttttgtctcatgcagcatta
gaagctggcgaaggtcaggctgatgcctttaccgatgccgtgcagttgatgacattgcat
tcagccaaagggcttgagttcccaatggtgtttatggcgggcgttgaagaaggattattc
ccgagcaagatggcactggatgaaggcgatcgtttagatgaagagcgccgtttgtgttat
gtcggtatgacccgtgctatgcaaaaactgtacatcagttatgctgagtctcgtcgtatt
tatggccgtgaagattatgctagcccatcacggtttattaacgaaattcctgaaaagttt
gttgagcaaatccgtatacgtgctcaggttaagccgtcagttagtcagcgttttcctgcg
aaggctacggttgccactaaaaaacctcatggttttaacgacaccggtcataaagtgggt
tctaaagtgaagcactttaagtttggtgaaggggtcgtgactagctttgaaggttctggt
gaaaaaggacgtgtgcaggttgagtttgtcgattttggcagtaaatggctgttggtgtcg
ttagcaaaactagagcgttgttaa
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