Shewanella sp. Arc9-LZ: GUY17_19970
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Entry
GUY17_19970 CDS
T10509
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K25495
AraC family transcriptional regulator, regulator of nimT
Organism
shea Shewanella sp. Arc9-LZ
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shea03000
]
GUY17_19970
Transcription factors [BR:
shea03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GUY17_19970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
QHS15208
LinkDB
All DBs
Position
complement(4653658..4654446)
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AA seq
262 aa
AA seq
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MFEAIGWDEIKNFEYMPQPIIAKIEHACASHEIPLHTHPKGQLILALHGYVTCEVSAKMW
MVPTHSAIWIPANKVHSNRASDNAELCHVFIDGSMQGMPQNTCTLAITPLVKELMCTLAG
SDQHYRVDSKTARLAQVLFEQLIEMPIQHLDFVLSKNVVIQAMSQQLINQPNDRKTLPQW
AKQFALTERTLARLITKETGMTFGKWRTQLHIIISLQALSDKQSVQQVSELLGYESVSAF
ITMFKKVMKISPMKYMNELNAY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagcaattggctgggatgaaataaagaattttgaatatatgccgcaacccatt
attgccaagatagagcacgcctgtgccagccatgagatccctttacacactcaccctaaa
ggccagttaattttagctttgcatggttatgttacctgtgaggtatcggcaaaaatgtgg
atggtgccaactcatagcgctatctggatccctgcaaataaagttcacagtaatcgcgcc
tcagataatgctgagctctgtcatgtatttattgatggcagcatgcaaggaatgccgcaa
aatacctgtacattggctattacgcctttagttaaagagttgatgtgcacgcttgctggt
agcgatcagcattatcgtgtagacagtaaaaccgcacggcttgcacaggtactatttgag
caactcattgagatgcctattcaacatttagactttgttctgtctaaaaatgtggtgatt
caagcgatgagccagcaattgataaatcagcctaacgatagaaaaacactgccgcaatgg
gccaaacaatttgccttaacagagcgtacattggcgcgactgatcacaaaagaaaccggg
atgacatttggaaaatggcgcactcaactgcatatcattatttcactacaagcgctttca
gataaacagagtgtgcaacaggtgtctgagttattaggctatgagtcggtaagcgcattt
attaccatgtttaaaaaagtaatgaaaatatcaccgatgaaatacatgaacgagttaaat
gcttactga
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