Shewanella sp. Arc9-LZ: GUY17_20520
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Entry
GUY17_20520 CDS
T10509
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
shea Shewanella sp. Arc9-LZ
Pathway
shea00061
Fatty acid biosynthesis
shea00071
Fatty acid degradation
shea01100
Metabolic pathways
shea01212
Fatty acid metabolism
shea02024
Quorum sensing
shea04146
Peroxisome
Module
shea_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
shea00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GUY17_20520
00071 Fatty acid degradation
GUY17_20520
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GUY17_20520
09145 Cellular community - prokaryotes
02024 Quorum sensing
GUY17_20520
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
shea01004
]
GUY17_20520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shea04147
]
GUY17_20520
Enzymes [BR:
shea01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GUY17_20520
Lipid biosynthesis proteins [BR:
shea01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GUY17_20520
Exosome [BR:
shea04147
]
Exosomal proteins
Exosomal proteins of breast milk
GUY17_20520
Exosomal proteins of breast cancer cells
GUY17_20520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QHS15314
LinkDB
All DBs
Position
complement(4774021..4775814)
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AA seq
597 aa
AA seq
DB search
MSLDQYHVVRLLQQQGQSLGNNIALEGFDMPAPWHTVTWGAFDTVTDSVAQLLIEFGLQV
QDKVVILAQNCPQWTCADIGALKARNVVVPVYPTSTIEQAVFIVNDSQAKLIFAGNQQQY
DMACTVAAQAECVQHIVVFDANVTLNADNHVYFDQVLAAQFNPLITNELNTRLANSNLDD
LFTLIYTSGTTGNPKGVMLDYRNFASMIKQHDSELPFTAGDVSLAFLPLSHVFERGWSMY
VLCRGGHNVYLNDTNRIKEALIAVKPHTLCAVPRFLEKIYSAVHDKVGQAPKARQTLFAW
AMRVGKRQFEVSQGRASGSLWLSAQWKLANKLVYSKLQQVLGGRLKFMPVGGAALDINVA
SFFHSIGVPVLCGYGMTETCATVTCNTLDNRVPGSNGKPLEAMQIKLGNDDEILVRGDTV
MRGYYNRPQDTADAFEDGWLKTGDAGRIDEQGNLYITDRIKELMKTSNGKYIAPQRVEGK
VACCPFIEQVAIVADARNYVSALIVPAFEALNTWAKAQGIHVENPIELLRHSQVVAHFEQ
RLIELQHELAGFEKIKKFTLLHEAFSMESGLITPTLKLRRKMIYSKYHSEINAMYGK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtcattagatcaataccacgtagttcgactcctgcaacagcaaggtcagtcattaggc
aataacattgcccttgaaggctttgatatgcctgcaccttggcataccgtaacgtggggc
gcatttgatacggttacagactcagtcgcacagttgttaattgagtttggcttacaagtg
caagacaaagtggtgattttagcgcaaaactgtccacagtggacctgtgcagatattggc
gcccttaaggctcgtaatgttgtggtaccggtatatccaaccagcaccatagagcaagct
gtattcattgttaacgactctcaagctaaattaatttttgcgggtaaccaacagcaatac
gacatggcttgcacagtggcagcccaagctgagtgcgtgcaacacattgtagtctttgat
gctaacgttacccttaatgccgataatcatgtgtattttgatcaggtattagcggcgcaa
tttaatccgctgattaccaatgagctcaatactagactcgccaatagcaacctagacgac
ttattcacgcttatttatacctctggcaccaccggcaatcctaaaggtgtgatgctcgac
taccgtaattttgcctcgatgattaaacagcatgacagtgagttgccatttactgcgggt
gatgtgtcgctggcctttttaccgcttagccatgtattcgagcgtggttggagcatgtat
gtattatgtcgcggcggccacaatgtgtatttaaacgacactaatcgcattaaagaagcc
cttattgcggttaaaccacataccttgtgtgccgtgccgcgatttttagaaaaaatttac
agcgcagtgcacgataaagtcggccaagcgcctaaagcgagacaaacattatttgcttgg
gcgatgcgagtaggtaaacgccaatttgaagttagccagggccgtgcttcaggaagtttg
tggttaagtgcacagtggaagctggctaacaagctggtttacagcaagttacagcaagtg
ttgggtggccggttaaagttcatgcccgtgggcggtgccgcgctcgatattaatgtggcc
agcttttttcacagtataggtgtaccggtattgtgtggttatggcatgacagaaacctgc
gctacggtaacctgtaatactttagataatcgtgtaccaggttcaaacggtaagccgcta
gaggctatgcaaatcaagcttggcaacgacgatgaaatcttagtgcgtggcgacactgtg
atgcgcggttattacaaccgcccacaagataccgcagacgcctttgaagacggttggtta
aaaacgggtgatgcaggacgcatcgatgagcaaggtaacttgtatattaccgatcgcatt
aaagagttaatgaaaacttcaaacggtaaatacattgcaccacagcgggttgaaggtaag
gtagcttgttgcccgtttatcgaacaagtcgccatagttgccgatgcacgcaattatgta
tcagccctaattgtgccagcatttgaagcattaaatacttgggctaaagcgcaaggtatt
catgttgaaaacccaattgagttgttacgtcactcacaagtggtggctcatttcgagcag
cgattaatcgagttgcaacatgagttagctgggtttgaaaaaatcaaaaaattcacctta
ttacatgaagcattttcgatggaatctggactcattacgccgacattaaagctgcgtcgt
aaaatgatttacagcaaatatcacagtgaaattaatgccatgtatggcaagtaa
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