Shewanella sp. H8: ABIS04_00065
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Entry
ABIS04_00065 CDS
T10623
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00071
Fatty acid degradation
sheh00280
Valine, leucine and isoleucine degradation
sheh00310
Lysine degradation
sheh00362
Benzoate degradation
sheh00380
Tryptophan metabolism
sheh00410
beta-Alanine metabolism
sheh00640
Propanoate metabolism
sheh00650
Butanoate metabolism
sheh00907
Pinene, camphor and geraniol degradation
sheh00930
Caprolactam degradation
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
sheh01120
Microbial metabolism in diverse environments
sheh01200
Carbon metabolism
sheh01212
Fatty acid metabolism
Module
sheh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ABIS04_00065 (fadB)
00650 Butanoate metabolism
ABIS04_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ABIS04_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ABIS04_00065 (fadB)
00310 Lysine degradation
ABIS04_00065 (fadB)
00380 Tryptophan metabolism
ABIS04_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ABIS04_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ABIS04_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ABIS04_00065 (fadB)
00930 Caprolactam degradation
ABIS04_00065 (fadB)
Enzymes [BR:
sheh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ABIS04_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ABIS04_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ABIS04_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ABIS04_00065 (fadB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XBJ48629
LinkDB
All DBs
Position
complement(16699..18849)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETLASLDAALDSIKQNTKVKALMLTSA
KSTFIVGADITEFLSLFKQDDATLLTWVEQANAVFNKLEDLPFPTISAVNGFALGGGFET
ILATDLRVVDTNTRIGLPETKLGIIPGFGGTVRLPRIIGADNALEWITSGKDQRPADALK
VGAIDAVVAPEDLEASAIQMLKEALDGSIDWQARRTLKQSPLMLPKLEALMCFSTAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLGRDDALKVEAQAFIKLAKTEVAQALIGIFLNDQYVK
AKAKKAGKLAHDVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLNEAAKIL
TVQVARGRSTPEKMAKVLNHITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEQYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNAKGFYAYSVDRRGKP
KKDIDPVSYELLSAEFGELKAFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctactattcaggttgagttacttgaagataatattgccaagttg
tgttttaacgcacaaggttcggtaaataaatttgacagagaaactctagcctcacttgat
gcagccttagatagcatcaaacaaaacaccaaggttaaagccttaatgctgacatcagca
aaaagcacctttatcgttggcgcagacatcaccgaatttttaagtttatttaagcaagat
gatgcaacactgctcacatgggttgaacaagccaatgcagtattcaacaaacttgaagat
ttaccttttccaactatctctgccgttaacggttttgctcttggtggtggtttcgaaact
attttagccactgacttacgtgttgttgataccaatacacgtattggattacctgaaacc
aaactaggtatcattcctggcttcggtggcacagtgcgtttacctagaattatcggcgct
gataatgcacttgagtggattacctcaggtaaagatcaacgaccagcagacgcattaaaa
gttggcgctattgatgccgttgtagctccagaagatttagaagcttcagcaattcaaatg
ttgaaagaagcacttgatggcagcatcgattggcaagctcgtcgtaccctaaagcaatca
ccattaatgctacctaaactagaagccttgatgtgttttagcaccgctaaggggatggta
ttctctgttgcaggcaaacattatccagcacctatggctgctgtgaatgttgttgaacaa
gctgcaggtttaggtcgtgatgatgcattaaaagtggaagctcaggctttcattaaatta
gctaaaacagaagttgcccaggcattaattggtattttcttaaatgaccagtacgttaaa
gctaaagcaaagaaagcgggtaaattggctcacgatgttaaccaagcagctgtattgggt
gctggtataatgggtggtggtattgcataccaaagtgcaagtaaaggcacgccaatcgtg
atgaaagacatcgcgcaacctgcacttgatttaggtttaaatgaagcggcgaagatactg
acagttcaagtagctcgtggacgttctacgccagaaaaaatggcaaaagttctcaaccac
atcactccttcactcgattatgctgccattaaaaatagcgatattgtagtagaagcggtt
gttgaacatccaaaagtgaaagcaacagtgctagctgaagttgaacaatatgtatctgaa
gatgccattattgcatcaaacacttcaactatctcaatcaacttattggctaaaagcctt
aagaaacctgaacgcttctgcggtatgcacttctttaatccagtgcacaaaatgccatta
gttgaaattatccgtggtgagcacagctctgaagaaaccattgcaaccgttgttgcgtat
gcaagcaaaatgggtaaaaccccaattgtagtaaacgattgtccgggcttcttcgttaac
cgcgtattgttcccatactttgcaggctttagtggtctactcgcagaaggcgctgatttt
gcggctgtcgataaagtcatggaaaaacagtttggctggccaatgggtccggcttactta
cttgacgtagttggtttagataccggtcatcatgcacaagcagtaatggcagaaggcttc
cctgatcgcatgggtaaaaacggcaaagacgcgattgatataatgtttgaaaataagcgt
ctaggccagaagaatgccaaaggtttctatgcttattctgttgaccgtcgtggtaagccg
aaaaaagacattgatccagtaagctatgaattattaagcgctgagttcggtgaattaaaa
gcattcgagtcagatgacatcatcgctcgttgtatgatcccgatgatcatcgaaacagtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttacttagacaccatgggcgta
gcaaactttgttgccctagcagacaaatatgcacaccttggtggtttatatcaagtaacc
gatgcgatgcgtgaacttgcagccaacaacggtagttactaccaagcctaa
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