Shewanella sp. H8: ABIS04_00345
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Entry
ABIS04_00345 CDS
T10623
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00630
Glyoxylate and dicarboxylate metabolism
sheh00680
Methane metabolism
sheh01100
Metabolic pathways
sheh01120
Microbial metabolism in diverse environments
sheh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABIS04_00345
09102 Energy metabolism
00680 Methane metabolism
ABIS04_00345
Enzymes [BR:
sheh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
ABIS04_00345
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PA-IL
Motif
Other DBs
NCBI-ProteinID:
XBJ48680
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All DBs
Position
80266..83124
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AA seq
952 aa
AA seq
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MKLTRKSITAPTNEASSKLGINRRQFIKQMGIATGGIAAASMMGTGMIRRAEAKDVPYDA
PTEIKRTICSACAVGCGLYAEVQNGVWTGQEPAFDHPFNAGGHCAKGAALREHGHGEKRV
KYPMKLVGGKWKKISWEQAFNEVGDKMLDIRKESGPDSIYFMGSAKFSNEGCYMYRKFAA
MWGTNNIDHCARICHSTTVAGVANTWGYGAQTNSFNDIQNANAIFFIGSNPAEAHPVAMQ
HILIAKEKNNAKIIVVDPRFTRTAAHADLHCGLRPGTDIPFIYGMLWHIFENGWEDKTFI
QERVFEMESIRAEAKKFPPKEVASITGCSEEEVYQAAKLMADNRPGTVIWCMGGTQHHVG
NANTRAYCILQLALGNMGVSGGGTNIFRGHDNVQGATDLGLLFDNLPGYYGLTSGAWAHW
TNVWSLDLDWVKSRFDQNEYLGSLPINTPGIPCSRWHDGVLESAENLTQKDNIRMGFFWG
QSVNTETRQNDVRDALDKMDTVVVVDPFPTMAAVMHRRTDGVYLLPATTQYETEGSVSNS
GRSQQWREKVIEPLFESKTDLEIMYRLSQKLGFDKEYTKRIAKDANDMLVIEDVTREINR
GMWTIGMTGQSPERIKLHTQNWGLFSNKTLEAPGGEVKGETYGLPWPCWGTPEQKHPGTQ
ILYDTSKHVSKGGGNFRARFGVEYQGENLLADGSFSKGAEIEDGYPEFTADMLKQLGWWD
DLTAEEKQHAEGNNWKTDISGGIQRVAVKHGCTPYGNAKARCIVWNFPDQVPIHREPLYT
PRRDLVSKYPTYDDMRVYRLPTLYKTIQQHDSSVKYPLILTSGRLVEYEGGGEESRSNPW
LAELQQEMFVEMNPADAADRGLRDGDSIWLEGAEGGRIKIKAMVTPRVKPGVTWMPYHFA
GVMHGESLAANYPEGTVPFVIGESANTAMTYGYDPVTQMQETKASLCQIEKA
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaactcgcaagtcaatcacggctcctaccaatgaagcttcaagtaagcttggt
attaatcgtcgtcaatttataaaacaaatgggtattgctaccggtggtattgcggctgca
tcaatgatgggcacaggcatgatccgtcgtgctgaagcgaaagatgtaccctacgatgca
ccaacagaaatcaagcgcactatatgtagtgcttgtgcggtagggtgtggtttatacgct
gaagtacaaaatggcgtgtggacaggccaagaacctgcattcgatcatccattcaatgct
ggcggacattgtgccaaaggtgctgcattacgcgaacatggccatggcgaaaaacgcgtt
aaatacccaatgaaattggttggcggcaagtggaaaaaaatatcttgggagcaagctttt
aacgaagtgggtgacaagatgttggatattcgtaaagagtctggtcctgattcaatttac
tttatgggtagtgctaagttttcgaacgaaggctgctatatgtatcgcaaatttgcagca
atgtggggtacgaacaatatcgaccactgtgcgcgtatttgtcactctaccacggtagcc
ggtgttgctaacacttggggctacggtgcgcaaaccaactctttcaatgatattcaaaac
gccaatgcaatcttttttatcggttctaatcctgccgaggcgcatccagttgcaatgcaa
catatcttgatcgcgaaagagaaaaacaacgctaaaataattgttgtagatccacgcttt
actcgtactgctgcacatgcagacttacattgtggcctacgtcctggtactgacatcccg
tttatctacggtatgttatggcacatctttgaaaacggttgggaagataaaacctttatc
caagaacgtgttttcgaaatggaatctattcgtgcagaagccaagaagttcccaccaaaa
gaagtagccagtatcacaggttgtagcgaagaagaggtttaccaagctgcgaaactgatg
gccgataaccgtccaggtactgttatttggtgtatgggtggtactcagcatcacgtcggt
aatgctaacactcgcgcttattgtattttacaacttgcacttggcaacatgggtgtatca
ggtggtggtactaacattttccgtggtcacgataatgtgcagggtgcgactgacttaggt
ttattattcgataatttaccaggttattacgggttaacttctggagcatgggcacattgg
accaatgtttggagcctagatttagattgggttaaatcacgctttgatcaaaacgaatat
ttaggcagtttgccaatcaacactccgggtattccatgttctcgctggcatgatggtgtg
ttagaaagcgctgagaatttaactcaaaaagacaatattcgtatgggtttcttctgggga
cagtcagttaacaccgaaacccgccagaatgatgttcgtgatgcactagacaagatggac
actgtggttgtagttgatccattcccaaccatggcagccgttatgcaccgtcgtacagat
ggcgtgtacttgttacctgcaacgactcaatacgaaacagagggttcagtctctaactct
ggtcgtagccaacaatggcgtgaaaaagtgatcgagccattatttgaatcgaaaactgac
cttgaaattatgtaccgcttatcgcaaaagcttggctttgataaagagtacaccaagcgt
atcgctaaagatgccaatgacatgctagtgatagaagacgtgactcgcgaaattaaccgc
ggtatgtggactattggtatgacaggccaaagccctgagcgtattaaactgcacacccaa
aactggggattattcagcaataaaacgttggaagctcctggtggcgaagttaaaggtgaa
acttatggtttgccttggccatgttggggtacgccagaacagaaacacccaggtacacaa
attctgtatgacacaagtaaacatgtgtcaaagggtggtggtaacttccgtgcccgtttc
ggcgttgaataccaaggcgagaatctgttagcagacggcagcttttctaaaggtgctgaa
attgaagatggttatccagagttcactgcagacatgcttaagcagcttggctggtgggat
gatttaacggccgaagagaaacaacacgctgaaggtaataactggaaaaccgatatttct
ggcggtatacagcgtgtcgctgttaaacatggttgtactccttacggtaatgctaaagca
cgttgtatcgtgtggaatttccctgatcaggtgcctattcaccgcgaaccactgtataca
ccacgtcgtgacttagtgagtaaatatccaacttacgatgatatgcgagtttatcgttta
ccaactttatataaaacaattcaacagcatgatagttcagttaaatatccattaatactg
acatctggtcgtttggttgaatatgaaggtggtggtgaagagtcgcgttctaacccttgg
cttgcagaactacagcaagaaatgtttgttgaaatgaaccctgcagatgctgctgatcgc
ggtttgcgtgatggtgactcaatatggttagaaggtgctgaaggcggacgcattaagatt
aaggcgatggtaactccacgcgttaagcctggtgtgacttggatgccatatcactttgct
ggtgtaatgcacggcgaaagtttagcggctaattaccctgaaggcacagtgcctttcgtt
atcggtgaatcagcgaacactgcaatgacttatggttatgaccctgtgactcaaatgcag
gaaaccaaggcgtcgctttgtcagattgaaaaagcgtaa
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