Shewanella sp. H8: ABIS04_01260
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Entry
ABIS04_01260 CDS
T10623
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sheh03021
]
ABIS04_01260 (rpoH)
Transcription machinery [BR:
sheh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABIS04_01260 (rpoH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
XBJ48844
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Position
294838..295695
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AA seq
285 aa
AA seq
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MTYQTQSMALAVPHNASSLEAYIQSVTSINMLDADTEYDIAKRLQENGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNIRKSKKRLGWFSDAEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLTNDSDDDHHDFAPALYLEDHSSDVADQVEHADWEADSQTRLLSAIKTLDERSQ
HILRARWLDDTKVTLQELASTYEVSAERIRQLEKNAMNKLKSCME
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcaaacgcaatcaatggctctagctgttccgcataatgcaagcagtttagaa
gcgtatatccagtcagtgaccagcatcaatatgttggacgccgatactgagtatgacatc
gccaagcgtttacaagaaaatggtgatctacaagctgcaaagcaattaattatgtcgcat
cttcgttttgttgtacatgtggcgaaaggttattctggatacggtttaccgcaggcagat
cttattcaagaaggtaacattggtttgatgaaagcggttaaacgctttgatcctaatgtc
ggtgttcgtcttgtgtcttttgcagtgcattggattaaggcagaaattcatgaatacgtg
ttgaaaaactggcgtatcgtgaaagtggctaccaccaaagcacagcgtaaattatttttt
aatatccgtaagtctaaaaagcgtttaggttggttcagcgacgctgaagtgaccatggtg
gctgaaaacctaggggtatcgaaagcagatgtaaccgaaatggaatctcgaatggcagcc
caagatcctgctttcgatttaaccaatgacagcgacgatgatcaccatgattttgcccca
gcattatatttagaagatcattcttctgatgtggcagatcaagttgaacacgccgattgg
gaagccgattctcaaacacgtttattatcagcaatcaaaacgttagacgaacgtagccag
catatattacgtgcgcgttggttagatgatactaaagtgactttgcaggagctcgcatcg
acttatgaagtctctgctgagcgaattagacagctagaaaagaatgccatgaacaagctt
aaatcttgtatggagtaa
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