Shewanella sp. H8: ABIS04_01280
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Entry
ABIS04_01280 CDS
T10623
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00130
Ubiquinone and other terpenoid-quinone biosynthesis
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
sheh01240
Biosynthesis of cofactors
Module
sheh_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
ABIS04_01280 (menD)
Enzymes [BR:
sheh01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
ABIS04_01280 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
XBJ48848
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Position
complement(299241..300980)
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AA seq
579 aa
AA seq
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MQQQTSADMNLLWGQLILEELARLGVKHVCMAPGSRSTPLTLAAASQTQLTRHIHFDERG
LGFMALGLAKASNTPVAIITTSGTAVANLYPAIVEAWLTHVPLIVLSGDRPPELIDCGAN
QAIIQPAIFAQYAKQINLPTPDLGYPANALLSTIDHAVANQHLPVHINCMYREPLYPTEL
MTLAHVKKTASVTTATYLAPLNQWFENTKPLTHYAGLNSAELPTTDALMRFVHGKGVIIV
GTLAPEDNPQQIIALAQKLGWPVLVDAQSQLRQHPGVIGHVDQLLLNPKANKQLEQAERV
LVFGGRFISKRLIQFLAQQSWHSYWQVVKHGDRLDQSHQPKSLFQASVQAVCQLPWSRSS
QANWALQLLPINESLESLFKQQIDHTTFGEAQVVRTIALAQTDNNILFIGNSLPIRLYDM
YAPIATNTPAIYTNRGASGIDGLIATACGVAAGKKAPTTLVIGDISCLHDFNSLALLKQM
TQPFVLVILNNDGGNIFNLLPVPNEELRNDFYRLSHGLEFGYGAAMFGLAYRQVDDIESF
NEAYQEAFEFNYASVIEVNVSPTQASDQIAQINQWVKQH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacagaccagcgccgatatgaatttgttatggggtcaattgatcctcgaagaa
cttgcacgcttaggcgttaagcatgtatgcatggcgccaggttctcgctcgactccgtta
acattggcagcggctagccaaacccaactcacacggcatattcattttgacgaacgtggt
ttagggtttatggcccttggactggcaaaagccagcaatacgcctgtggccattattaca
acgtcaggcaccgcggtagcaaatctgtatccggctattgtcgaagcgtggttaactcat
gtgcccttgattgtgttatctggcgatagaccgccagaactgattgattgtggtgctaat
caagcgataattcagccagccatttttgctcaatatgctaagcaaattaacttaccaacg
ccagatctcggttatcccgccaatgcattattaagtaccatcgatcatgcggtagccaat
caacatctgccagtacacataaactgtatgtaccgtgaaccgttatatccaacagaattg
atgacattagctcatgtaaaaaaaacggctagcgttaccacagcaacctatcttgcaccg
ttgaatcaatggtttgaaaatactaaaccattaactcattatgcgggccttaatagtgcc
gagttaccgactacagatgctttaatgcgttttgttcatggtaaaggcgtgataatagtt
ggcaccttagcccctgaagataatcctcagcaaattatcgcattagcccaaaaactaggc
tggccagtattagtggacgcgcagtcgcagttacgtcagcatcctggtgtcatcggccac
gtagaccagctactgttaaaccctaaagccaacaaacagcttgaacaagccgaacgggtg
ttagtgtttggtgggcgttttatttccaaacgtttaattcaatttttggcccaacaatct
tggcatagctactggcaagtggttaagcatggcgatcgcttagatcagagccaccaacct
aaatcattatttcaagccagtgtgcaggcagtttgccaattaccttggtcgcgctcatca
caagccaactgggcactgcaattattaccaataaatgaatcactggagtcgctgtttaaa
caacaaatcgaccacaccactttcggtgaagctcaagtcgtgcgcactattgctttggct
caaacagataacaacatactgtttattggtaatagtttacctattcggctttatgatatg
tatgcgccaattgccaccaatactccggcaatttataccaataggggtgcatcgggtatc
gacggtttaattgcaactgcatgtggtgttgcggcaggcaaaaaagcacccaccactctt
gttattggtgacatatcctgtttacatgatttcaattcattggcactgttaaaacaaatg
acccagccatttgtgctggttattctcaacaatgacggcgggaacatatttaatttattg
ccagtaccgaatgaagaacttcgtaacgacttttatcgcttaagccacggtttagaattt
ggttatggtgcagccatgtttggtttagcttatcgccaagtcgatgacattgaatcgttt
aatgaagcttatcaggaagcttttgagtttaattatgcctcagtgattgaggtcaatgtc
agcccgacgcaagcaagcgatcaaatagctcaaattaaccaatgggtaaaacagcactaa
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