Shewanella sp. H8: ABIS04_02715
Help
Entry
ABIS04_02715 CDS
T10623
Symbol
ygfZ
Name
(GenBank) tRNA-modifying protein YgfZ
KO
K06980
tRNA-modifying protein YgfZ
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_02715 (ygfZ)
Transfer RNA biogenesis [BR:
sheh03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
ABIS04_02715 (ygfZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgfZ_barrel
GCV_T
Motif
Other DBs
NCBI-ProteinID:
XBJ49119
LinkDB
All DBs
Position
complement(633783..634745)
Genome browser
AA seq
320 aa
AA seq
DB search
MTISVNQPDWDFIATSPALMLSSLTHMGLIEITGEQGRSFIHGQVTTDMTSLTADQWKWG
AHCDPKGKMLASFRTFAMGDSLFMLLPKSTLSLDLPQLQKYAVFSKAELADVSNDYQIIG
IAGTEAQAFVTEHFGDVSQALNLVEQGVIIRDNERFIAIIHNAAAETIISQSGQTLFDAS
AWQALEIKAGYPNIDAAHSGQYVPQMCNLQAINGISFTKGCYMGQETIARMKYRGGNKRA
LYILSGTSSKNISTDTQLEIALEDGFRRGGNIIECVQYGDKVLLTAVLPNDTENSVQLRV
AEDESSQLSIIELPYSLIDE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttcagtaaaccaaccagattgggatttcatcgccacgtctcctgcattaatg
ttatctagtttgactcatatgggattaattgaaatcaccggcgagcaaggccgcagcttt
attcatggccaagtcaccacagacatgacttcattaactgctgaccaatggaaatggggc
gcgcattgtgatcctaaaggtaaaatgctggccagtttccgtacatttgcaatgggcgat
agcctatttatgttgctgccgaaaagcaccttaagtctagatttacctcagttacaaaaa
tacgccgtatttagtaaagctgagctagcggatgtcagcaatgactatcaaataatcggg
attgccggaacagaagcccaagcctttgttactgagcattttggtgatgtatcacaagca
ctcaatcttgtagaacaaggtgtgattattcgtgataacgagcgctttattgccattatt
cacaatgcggcagcagaaaccatcatcagccagtctggacaaacgttgtttgatgcaagt
gcatggcaagcattagaaattaaagccggttatccaaacatcgatgccgctcattctggt
cagtacgtaccacaaatgtgtaatctgcaagccattaatggcattagctttaccaagggc
tgttacatgggccaagaaacgattgctcggatgaaataccgcggtggcaataagcgtgcg
ttatatattttgtctggcaccagcagcaaaaatatcagcactgacacacaattagaaatt
gcccttgaagacggtttccgccgtggtggtaatattattgagtgcgtccaatatggcgat
aaggtattactgacggctgtactgcctaatgatactgaaaatagcgttcaactgcgtgtt
gccgaagatgaaagttcacagttatcaattattgaattaccttattcacttattgatgag
taa
DBGET
integrated database retrieval system
