Shewanella sp. H8: ABIS04_02845
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Entry
ABIS04_02845 CDS
T10623
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABIS04_02845 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sheh01007
]
ABIS04_02845 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_02845 (lysS)
Enzymes [BR:
sheh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABIS04_02845 (lysS)
Amino acid related enzymes [BR:
sheh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABIS04_02845 (lysS)
Transfer RNA biogenesis [BR:
sheh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABIS04_02845 (lysS)
Prokaryotic type
Other AARSs
ABIS04_02845 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
XBJ49144
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All DBs
Position
665309..666811
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AA seq
500 aa
AA seq
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MTEHVQDENKLIAERRAKLDFMRTTCPANAHPNTWHRSHKAAELQAQYGEQTKEALEELA
FQTSIAGRVMAKRGPFLVIQDVSGRIQAYAGKPVQGDLKERYQGLDIGDIIGVKGQLHLS
GKGDLYVNMEEYELLTKALRPLPEKFHGLTDQETRYRQRYVDLIVNEDSRNAFIMRSKVV
SAIRNFMMKKEFMEVETPMMHVIPGGASARPFVTHHNALDMAMYLRIAPELYLKRLVVGG
FERVFEINRNFRNEGLSPRHNPEFTMMEFYMAYADYNDLMDLTEEMLSSIAIDLLGSAQM
PYGEHTVDFGGPYARLSMLEAIQKYNPDNATIQAMTYEQVKDLEFMRDLASSLGIKLEKF
WTCGQLLEEIFGETAETQLMQPTFITGYPADISPLARRNDNNDFITDRFEFFIGGREVAN
GFSELNDAEDQDRRFKAQVDAKDAGDDEAMFYDADYITALEHGLPPTAGQGIGIDRLVML
FTNTHTIRDVILFPAMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacacgtacaagatgaaaacaaactgattgctgagcgtcgcgcaaaattagac
ttcatgcgcaccacctgtcctgctaatgctcacccaaatacatggcatcgcagccataaa
gcggctgaacttcaggcacaatatggtgagcagaccaaagaagcattagaagaattagct
tttcaaaccagcattgctggccgtgttatggctaagcgtggtccgtttttggtgattcaa
gatgtgtctggtcgtattcaagcttatgctggtaagccagtacaaggcgatttaaaagag
cgttatcaaggtttagatatcggtgacatcattggtgttaaaggtcagctgcatttatct
ggtaaaggcgacttgtacgttaacatggaagaatatgagttactgaccaaagcattgcgt
ccgttacctgaaaaattccacggtttaactgaccaagaaacgcgttaccgtcagcgttat
gttgatttgattgtcaatgaagattctcgcaacgcattcattatgcgttctaaagtggtt
tctgctattcgtaacttcatgatgaaaaaagagttcatggaggttgaaaccccaatgatg
cacgttattcctggtggtgcttcagcacgtccgtttgtgactcatcataatgcgttagac
atggctatgtacttgcgtattgcacccgaattatatttaaagcgtttagttgtcggtggt
tttgagcgagtgttcgaaattaaccgtaatttccgtaacgaaggtttatcaccacgtcat
aacccagaattcaccatgatggaattctatatggcgtatgctgattacaacgatcttatg
gatttaactgaagaaatgctcagttcaattgccattgatctattaggcagtgcccaaatg
ccatacggcgagcacaccgtagattttggtggtccttatgctcgtttaagcatgttagaa
gcgattcagaaatacaatcctgacaacgcgaccattcaagctatgacctacgagcaagtt
aaagatctagagtttatgcgcgatttagcatcgagcctaggcatcaagctagaaaaattc
tggacttgtggtcagctgctggaagaaatatttggtgaaaccgccgagactcaattgatg
cagccaacctttattactggttatcctgcagatatttcgcctttggcgcgccgtaacgat
aataatgatttcattaccgatcgttttgagttctttatcggtggccgcgaagttgctaat
ggctttagcgagcttaacgatgctgaagatcaagaccgacgctttaaagcgcaagttgat
gcaaaagatgctggcgatgatgaagctatgttttacgatgcagactacatcactgcactt
gaacacggtttaccaccaacagcaggccaaggtattggtatcgatcgtttagtgatgcta
ttcactaatacccatactatccgcgacgtgattttattcccagcaatgcgcccacaagcg
taa
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