Shewanella sp. H8: ABIS04_03730
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Entry
ABIS04_03730 CDS
T10623
Name
(GenBank) serine hydrolase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00550
Peptidoglycan biosynthesis
sheh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABIS04_03730
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sheh01002
]
ABIS04_03730
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
ABIS04_03730
Enzymes [BR:
sheh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ABIS04_03730
Peptidases and inhibitors [BR:
sheh01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
ABIS04_03730
Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
ABIS04_03730
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
XBJ49309
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Position
complement(870896..872107)
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AA seq
403 aa
AA seq
DB search
MMTSKTAQLTTMLIASVVCFSSLAATPQPDIRPTPNRAPMVTPDAPSVAAKAYVLMDYNS
GRIIAEENAYESLNPASLTKMMTSYVIGHELRVGNITLDDDVTISKNAWAKNFPDSSKMF
IEVGKTVKVHDLNRGIIIQSGNDACVAMAEHIAGTEGAFVDLMNSWAKQLGMEDSYFENS
HGLDSENHKTTAYDMAILAAALIRDVPNEYKVYSEKSFTYNGIKQYNRNGLLWDKSLNVD
GIKTGHTSGAGYNLVSSGTSDGMRLITVVMGTASESARKAESKKLLNYGFRFFETITPYK
AGDTFVTQKIWYGDRETVDLGVMTDTPITLSRGKAKDLQANFELTKPLAAPLAKGETVGR
VFFQLDGKDIAQFPLVTLNEVQEGGWFSKLMDYFKQMFASWFE
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatgacttccaaaaccgctcaattaacaacaatgctgatagcatcagttgtctgtttt
tcttcactcgcagcaacgccacaaccagatatacgtccaacgccaaatcgcgcccctatg
gtgacaccagatgcaccaagtgttgcagccaaagcatacgtgctcatggattataattct
ggcagaatcattgccgaagaaaatgcttatgagagtttaaaccctgcaagtctaaccaaa
atgatgaccagttatgtgattggtcatgaactccgtgtcggtaatattacgttagatgac
gatgtcaccattagtaaaaatgcttgggcaaaaaatttccctgattcatcaaaaatgttc
atcgaagtgggtaaaacagtcaaagttcacgatttaaaccgcggtattatcattcaatca
ggtaatgatgcttgtgtagctatggctgaacatattgctggaacagaaggtgcattcgtt
gatttaatgaattcatgggccaagcaattgggcatggaagacagctactttgaaaactct
catggtttagactcagaaaatcataaaaccaccgcttatgatatggcgatactcgcggca
gcattaatccgagatgtgcctaacgaatacaaagtttattccgaaaagtcatttacttat
aacggcattaagcaatataaccgtaatggattattatgggataaaagcctcaatgttgat
ggtattaaaactggccatacatctggcgcaggttacaacttagtctcatctggtactagc
gatggcatgcgtcttattacagtcgtcatgggcacagcaagtgaatcagcacgtaaggca
gaaagtaaaaaattactcaattatggtttccgtttctttgaaaccatcacaccatacaaa
gctggcgatacctttgtcactcaaaaaatttggtatggcgatagagaaaccgttgatctt
ggtgtcatgaccgatactcctattacccttagtcgtggtaaagcaaaagatttacaagcc
aattttgaattaactaaaccattagctgctccgctagcgaaaggcgaaactgtaggccga
gtatttttccaacttgatggaaaagacatcgctcagtttccactcgtcaccttgaatgaa
gttcaagaaggcggttggttcagtaagttaatggattatttcaaacaaatgttcgcaagt
tggtttgaataa
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