Shewanella sp. H8: ABIS04_04960
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Entry
ABIS04_04960 CDS
T10623
Symbol
slyD
Name
(GenBank) peptidylprolyl isomerase
KO
K03775
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:
5.2.1.8
]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sheh03110
]
ABIS04_04960 (slyD)
Enzymes [BR:
sheh01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
ABIS04_04960 (slyD)
Chaperones and folding catalysts [BR:
sheh03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
FKBP
ABIS04_04960 (slyD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKBP_C
Motif
Other DBs
NCBI-ProteinID:
XBJ49531
LinkDB
All DBs
Position
complement(1127964..1128524)
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AA seq
186 aa
AA seq
DB search
MKITKHAAVTIHYRLSDEQGVLIENSFESEPMVYLHGTENLIPGLESVLEGKTAGEKIEA
KIPAEQAYGEYHPDLKQEVPVSAFGDIEDIVPGMRFIAETEMGQRPVQVTEVKDDVIVVD
GNHPLAGQTLHFSVEVIAVREATAEELSHGHIHAEGGCGSHEHGHDHESCGTEKPGCDGN
GGCGCR
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattacaaaacatgcggcggtcactattcattaccgcttatctgatgagcaaggc
gtacttattgaaaattcatttgaaagtgaaccgatggtttacttacatggtactgaaaat
ttaattcctggacttgaatcagttttagaaggtaaaactgctggtgaaaaaattgaggcg
aagatcccggctgaacaagcttatggcgaatatcaccctgatttaaagcaagaagtacct
gtaagtgcttttggcgatatagaagacatcgttcctggtatgcgttttattgctgaaact
gaaatgggtcaacgcccagttcaagtaactgaagtgaaagacgatgtcattgttgttgat
ggcaaccaccctcttgcaggtcaaacactgcatttcagtgttgaagttatcgcggtaaga
gaagctacagcagaagaactgtctcatggtcacattcatgccgaaggcggttgtggtagc
catgaacacggccatgatcacgaatcatgtggcacagaaaaacctggctgtgatggtaat
ggcggttgtggctgtcgttaa
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