Shewanella sp. H8: ABIS04_05000
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Entry
ABIS04_05000 CDS
T10623
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_05000
Transporters [BR:
sheh02000
]
Other transporters
Pores ion channels [TC:
1
]
ABIS04_05000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
Phenol_MetA_deg
Porin_4
OprF
Opacity
Ig_NOMO
Motif
Other DBs
NCBI-ProteinID:
XBJ49539
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Position
complement(1138245..1139372)
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AA seq
375 aa
AA seq
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MMKNTLKVVLLTSMLPFAASAAEELTPWYVGAGLGVNNYEPNCDQKTMKVCGEDDPYAWD
VFGGYLFNEYVGIELGYRDLGRAEWTDYSDKRNDVGARGVALGFVGFYPLADKWSLSAEA
GAFNYLISNKKEYNTEYYSDSGIAPYLGAGVGYNFTDNLKLQAKYRRYENLDEEKWDTLS
MESNYWGLELSYRFGASTPAPVAAPVAAPVVAPVVVALGDDDKDGVTNNIDKCLDTPSTH
KVDATGCTVYENVTTKYDLGGILFANDSADIRSGSFADLEKLADHLNKYPQHTVSIQGHA
SNVGKAAYNMKLSERRAVAVANSLNKKYGISMSRINSVGYGITKPVMQGSSAEANRVNRR
IEAIVTGTEKRPVMR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaacacattaaaagtagtattactcacatctatgttgccttttgctgcttct
gctgcagaagaactaacgccttggtatgttggtgcaggtttaggcgtcaataactatgaa
ccaaattgtgaccaaaaaaccatgaaagtatgtggtgaagatgatccatatgcttgggac
gtatttggtggttatttatttaacgaatatgttggtattgaattaggttatcgtgacctt
ggccgtgctgaatggactgattattcagacaaacgcaatgatgttggcgctcgtggcgtt
gcattaggttttgttggtttttaccctcttgcagacaagtggagtttatcggctgaagct
ggtgcatttaactacctaatctcgaacaaaaaagaatacaacactgaatattacagtgat
agcggtattgcaccataccttggtgcaggtgttggctataactttaccgataatttaaag
ttacaagccaaatatcgtcgttatgaaaatcttgacgaagaaaagtgggacacgctttca
atggaaagcaattattggggccttgaactaagctaccgttttggtgctagtactccagct
cctgttgccgctcctgttgccgctccagttgttgcaccagttgttgttgctcttggtgat
gatgacaaagatggcgtaacaaacaacatagacaaatgtctagacactccatcaactcat
aaagttgatgcgactggttgtactgtttatgaaaacgttacaactaagtatgacttaggt
ggtattttatttgctaatgattcagctgatatccgttctggttcatttgctgatttagaa
aaacttgctgatcatttaaataaatacccgcaacacactgtatctattcaaggccatgcg
tctaacgtaggtaaagcggcatacaacatgaagctttctgagcgtcgtgcggtagctgtt
gcaaattcactaaacaaaaagtacggcattagcatgagccgtatcaattctgttggttac
ggtataactaaaccagttatgcaaggtagctcagctgaagctaaccgcgttaaccgtcgt
attgaagcaatcgttactggtactgaaaaacgtcctgtaatgcgttaa
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