Shewanella sp. H8: ABIS04_05550
Help
Entry
ABIS04_05550 CDS
T10623
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00900
Terpenoid backbone biosynthesis
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ABIS04_05550 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sheh01006
]
ABIS04_05550 (ispA)
Enzymes [BR:
sheh01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
ABIS04_05550 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
ABIS04_05550 (ispA)
Prenyltransferases [BR:
sheh01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ABIS04_05550 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
XBJ49642
LinkDB
All DBs
Position
complement(1271248..1272129)
Genome browser
AA seq
293 aa
AA seq
DB search
MLAEAIKTYQTRVNGILNQHLTQLDDAAPDLKAAMLHGALLGGKRIRPFLVYSVGEMLGV
NSHALDKAAAAIECIHAYSLIHDDLPAMDNDALRRGQPTVHIAFNEATAILAGDALQTLA
FEIMTAPCSDLHPKQQLAMVRALAKASGYQGMCGGQAIDLSATDNSIELTRLTELHNKKT
GALISCAVELALIAADIPDEHYQLMMKYAQTLGLAFQVQDDILDITTSTEELGKPQGSDQ
QSNKSTFPKLLGLEGAKDCAEQLIQDALSALTKLPYNSQLIADFAHYIVERRL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagctgaagcgataaaaacataccaaacacgcgttaatggtattctaaaccaacat
ttaacgcagcttgatgatgcggcaccagacttaaaagcagcaatgcttcatggggcatta
ttgggtggtaaacgcattaggccttttttagtctacagtgtcggtgagatgcttggggtt
aatagtcatgcgcttgataaggccgctgctgccattgaatgtatccatgcttattcgtta
atacacgatgacttaccggcaatggacaatgatgcacttcgtcgtggtcaacccacggtt
catattgcatttaatgaagccacagcaattcttgcgggtgacgcactgcaaaccttagct
tttgaaataatgacggcaccctgtagcgacttacatccaaaacagcaattagccatggtt
agggcattagcaaaagcatccgggtatcaaggcatgtgcggtggtcaagcaattgatctc
agtgccacagataacagtatagaattaactagattaaccgaattacataataaaaaaacc
ggggcattaatcagttgtgccgtcgagcttgctttaattgctgccgacatacctgatgaa
cactatcaattgatgatgaaatacgcccaaacacttggattagcgtttcaagtacaagac
gatattttagacatcacaacaagcacagaagagctggggaaacctcagggttctgatcag
caatcgaataaaagtaccttccccaaattgttaggtctcgagggtgccaaagactgtgcg
gaacaactaatacaagatgcactatcagcgctgactaaattaccatacaatagccagtta
attgcagacttcgcccactatatagttgagcgaagattataa
DBGET
integrated database retrieval system
