Shewanella sp. H8: ABIS04_06145
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Entry
ABIS04_06145 CDS
T10623
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00071
Fatty acid degradation
sheh00280
Valine, leucine and isoleucine degradation
sheh00310
Lysine degradation
sheh00362
Benzoate degradation
sheh00380
Tryptophan metabolism
sheh00410
beta-Alanine metabolism
sheh00640
Propanoate metabolism
sheh00650
Butanoate metabolism
sheh00907
Pinene, camphor and geraniol degradation
sheh00930
Caprolactam degradation
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
sheh01120
Microbial metabolism in diverse environments
sheh01200
Carbon metabolism
sheh01212
Fatty acid metabolism
Module
sheh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ABIS04_06145 (fadJ)
00650 Butanoate metabolism
ABIS04_06145 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
ABIS04_06145 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ABIS04_06145 (fadJ)
00310 Lysine degradation
ABIS04_06145 (fadJ)
00380 Tryptophan metabolism
ABIS04_06145 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ABIS04_06145 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ABIS04_06145 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ABIS04_06145 (fadJ)
00930 Caprolactam degradation
ABIS04_06145 (fadJ)
Enzymes [BR:
sheh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ABIS04_06145 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ABIS04_06145 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ABIS04_06145 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
XBJ49743
LinkDB
All DBs
Position
1400450..1402576
Genome browser
AA seq
708 aa
AA seq
DB search
MEKTFNLARRDDGIAILTMDVPGETMNTLRAEFGPEITDILTEVKADSDITGLVIISGKV
DSFVAGADISMLAACKSEADAKALSQQGHVLFSELEGLSIPVVAAINGACLGGGLELALA
CHLRICSDDKKTMLGLPEVQLGLLPGTGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPNSILLETAIELAKKGKKAAKPVVQSKINQFLESTSFTRDIIFDQARKQVLKK
TQGNYPAPAKIIDCVRQGMSKGVVKGLEVEATHFANLVMSKESAALRSLFFATTEMKKET
GAEGAEPREVKKVMVIGGGLMGGGIASVTTTKAKIPVRVKDISEQGLSNALAYAYYLLDK
GVKRRHMIPAVRDNIMALMTTTTEYNGIKDADIVVEAVFEDLALKHQMVKDVERECGENT
IFASNTSSLPIGQIAEAAKRPENVIGLHYFSPVEKMPLVEVIAHKSTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQRIEHVDNALVKFGFPVGPMTLLDE
VGIDVGAKISPILEKELGDRFKAPAAFDKLLADDRKGRKNGKGFYQYGPKAKKAKLVDES
IYKVLDIATASDKEAKEVAERCTIQMLNEAVRCLEEGIIASARDGDIGAIFGIGFPPFLG
GPFRYIDTLGAANLVTTLHRYQTLYGDRFAPCDTLVNMANDGSLFYKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacatttaatttagctcgtcgtgacgatggtattgcgattttaaccatggat
gttcctggtgaaaccatgaacaccttaagagcagagtttggccctgaaattacagatatt
ttaactgaagttaaagctgattcagacatcacagggttggttataatttctgggaaagtc
gattcttttgttgccggtgctgatattagcatgcttgcagcatgtaagagtgaagcggat
gcaaaggcattgtcacaacaaggtcatgtattattttcagaacttgaaggattatcgatt
cctgttgttgcggccataaacggtgcttgtttaggcggtggtttagagttagcgctagca
tgtcatttacgtatatgcagtgatgataaaaaaaccatgttaggtttgccagaagtgcaa
ctcggtttgctacctggtactggtggtactcagcgtttacctcgtttagtgggtattact
accgcactggatatgatgttaaccggtaaacaaattcgtcctaaacaagcattgaaaatg
ggcttagtgaatgatgttgtacccaattctattttgcttgaaactgcgattgagttagct
aagaaaggcaagaaagccgctaaacctgtcgttcaatctaaaattaatcagtttttagaa
tcaacgtcatttacccgagacattatttttgatcaagcacgcaagcaagtgctcaagaaa
actcaaggtaattatcctgccccagctaagattattgactgcgttcgtcaaggtatgagt
aaaggtgtggtgaaaggcttagaagttgaagccactcattttgctaatttggtgatgtct
aaagaatctgctgcgttaagaagtttattttttgctacgactgagatgaaaaaagagact
ggtgcagaaggtgctgaacctcgcgaagtcaaaaaagtgatggtgataggtggcggttta
atgggcggcggtattgcgtctgtaacaaccactaaggcaaagatacctgttcgcgttaaa
gatatttcagaacaaggtttgagtaatgccttagcatatgcttattatctattagataaa
ggtgttaagcgtcgtcatatgatacctgccgttcgcgataatataatggcattaatgacg
accaccactgagtataacggaattaaagatgctgatattgttgttgaagcagtatttgaa
gacttagctttgaaacatcaaatggtgaaagatgttgaacgtgagtgtggtgaaaacacc
atttttgcttctaatacttcatcgttacccattgggcagattgccgaagcggcaaaacgt
cctgaaaatgtaattggtttacattatttctctccagtagaaaaaatgccattagttgaa
gtgattgcgcataaaagcacatcacctgaaacaattgccacaacagttgcctttgctcgt
aagcaaggtaaaacgccaatagttgtacaagacggcgctggtttttacgttaatcgtatt
cttgcactttatatgaatgaagcggcgcagttattactagaaggtcaacgaatagagcat
gtcgataatgctctggttaaattcggttttcccgttggcccaatgacattgcttgatgaa
gtgggtattgatgttggtgctaagatttcgcctatattagaaaaagaattgggtgataga
tttaaagcgcctgcggcttttgacaaattattagctgatgatcgtaaaggtcgtaaaaat
gggaaaggtttctatcaatatggacctaaagccaaaaaagccaagttagtagacgagtct
atttacaaggtgttggatattgcaaccgcttcggataaagaagcgaaagaagtagcagag
cgttgtactatccaaatgttaaacgaagcggttcgatgtttagaagaggggattatcgcc
tcagctagagacggtgatattggtgccatatttggtattggtttcccgccatttcttggt
ggtccattccgttacattgatactttaggtgccgccaatttagtgacaacgttacatcgt
taccaaacactctacggtgatcgttttgcaccatgtgatacgttagtaaacatggctaat
gatggaagtttattttataaaaaataa
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