Shewanella sp. H8: ABIS04_06370
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Entry
ABIS04_06370 CDS
T10623
Name
(GenBank) sugar diacid recognition domain-containing protein
KO
K02647
carbohydrate diacid regulator
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sheh03000
]
ABIS04_06370
Transcription factors [BR:
sheh03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABIS04_06370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
HTH_8
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
XBJ49777
LinkDB
All DBs
Position
complement(1449486..1450643)
Genome browser
AA seq
385 aa
AA seq
DB search
MFQIDTLIAAKIVDRTMKIIGHNINVMNAQAVILGSGDVERIGTIHEGALLAISQNRNVE
ISQTIASNLQGVKPGLNLPLHYQGQVVGVIGITGEPDTLSHYGELLRMTAEMIVEQANLQ
EQLQWQNRQKEEFISQLIHANEQDLVSLKQWALQLGIDLSVPRVAAIIELDSNNPLYQQD
NQALKQVLYLLQNPVRDNLIAMTSLTQLVILKPAFLDGKQFDPELENQRINQLLKRLPAN
MQLSLHISLGHYFSGDLGISYSYRTAKETMDIGKKLHPTKSKYLYQDYSLQVLLSGLRHH
WRGNALAGPYMKLIEVDKNLQLQKTLAAYLEHMGDIQTCANSLFIHRNTLRYRLDKIQTI
TNIDLHSFNGLLSLYLGQLIHQPNA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagattgacacactaattgccgctaagattgttgaccgaaccatgaaaattatt
ggccataatatcaatgtgatgaatgctcaagcagttatattgggatcaggtgatgttgaa
cgaattggcactatacatgaaggcgcattattggctattagccaaaaccgtaacgttgag
atcagtcaaactatcgcttcaaatctacaaggggtaaaacctgggcttaatttaccattg
cattatcaaggtcaagttgtcggtgtgattggcatcacaggcgaacccgatacgttaagt
cactatggtgaattacttagaatgaccgcagaaatgattgtcgagcaagccaatttacaa
gaacagttacaatggcaaaatcgtcaaaaagaagagtttatttcacaactcatccatgct
aacgaacaagacttagtttcattaaagcaatgggcattgcaattaggtattgatttaagc
gtaccaagagtcgctgcaattatcgaattagatagtaataacccactatatcaacaagat
aatcaagcattaaaacaagtcctgtatttattacaaaaccctgtacgcgataatttaatc
gccatgacttcactaacacaattagtgattttaaaacctgcgtttttagacggtaaacaa
tttgacccagaactcgaaaatcaacgcatcaaccaattactcaaacgcttacccgcaaac
atgcaacttagcctacatatatcgttaggccattattttagcggtgatttaggtatcagt
tactcttaccgcaccgccaaagaaaccatggatattggcaaaaaattacacccaacaaaa
agcaaatatttatatcaagattacagcttgcaagtgcttttatcaggcttacgtcaccac
tggcgaggtaatgcccttgccgggccttatatgaaactgattgaagtggacaaaaatcta
caactgcaaaaaacccttgccgcttatcttgaacatatgggggacatacaaacctgtgct
aacagcttgtttatacatcgaaacacattacgttaccgattagataagattcaaaccatc
accaatatcgatttacacagttttaatggcttactgagtctctatttaggtcagctaata
catcaacctaacgcctaa
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