Shewanella sp. H8: ABIS04_06600
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Entry
ABIS04_06600 CDS
T10623
Name
(GenBank) oligopeptide/dipeptide ABC transporter ATP-binding protein
KO
K19229
cationic peptide transport system ATP-binding protein
Organism
sheh Shewanella sp. H8
Pathway
sheh01503
Cationic antimicrobial peptide (CAMP) resistance
sheh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABIS04_06600
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ABIS04_06600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_06600
Transporters [BR:
sheh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
ABIS04_06600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
Motif
Other DBs
NCBI-ProteinID:
XBJ49817
LinkDB
All DBs
Position
complement(1502725..1503732)
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AA seq
335 aa
AA seq
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MPLLDVRNLTIELDTPEGTVKVLEKVSLTINPGEIHGLVGESGSGRSLFAKAILGVLGPN
WHVIADRMMWDGKNLLEMSAKQRRCLMGTEIAMIFQDPSGSLDPVKTIGSQLIEALVTNK
NIPFWRRGRDTYLNSLKWLHKVGIKKPKQLMKRFPWELSEGECQKVMIAMAVANHPKLLI
ADEPTNSMELNTQAQIFRLLSQLNQLQNVSILLVSHELETMVHWCDNLTILYSGQVMESG
PVKQIIAMPYHPYTRALFKNLPEHTAKMRHKAKLPTLPGSAPSLQHLPAGCRLGPRCPEA
QRKCVKQPNLEHIKDRYFACHFPYKSEQEDDDTIA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgcctttactcgatgttcgtaatctcaccattgaattagatacacctgagggcacggtc
aaagtgcttgaaaaagtcagtttgactattaatccaggcgaaattcatgggcttgtgggt
gaatcaggctcaggacgaagtctatttgctaaagcaattttaggtgttctaggccctaat
tggcatgttatagccgaccgaatgatgtgggatggaaaaaatttattagaaatgagtgct
aaacaacgacgttgtttaatgggcaccgaaatagcgatgattttccaagatccttccggc
agtttagatccagttaaaaccattggtagtcaattgattgaagccctagtgaccaataaa
aatattcctttttggcgccgcggacgagatacttatttaaactcgctaaaatggttacat
aaagtcggcattaaaaaaccgaaacaattaatgaagcgtttcccgtgggaattgtctgaa
ggagaatgtcaaaaagtcatgatcgccatggccgttgccaatcatcctaaactgctcatt
gctgatgaaccaaccaattcaatggagctcaatactcaagcgcaaatttttagattatta
tcccaactcaatcaattacaaaatgtgtctattttattagttagccacgagcttgaaacc
atggtgcattggtgtgataacttaacgattttgtatagcggccaggtaatggagtctgga
ccggttaaacaaataatagctatgccgtaccatccatatacacgggcattatttaaaaat
ctacctgaacatacagcaaaaatgcgtcataaggctaaactaccaactctgcctggttca
gctccctctttacagcatttacctgctggttgccgactcggtcctcgttgtccagaggca
caacgaaaatgcgtaaaacagcctaatcttgaacatattaaagatcgctatttcgcctgc
catttcccttacaaaagtgagcaagaagatgacgacaccattgcttaa
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