Shewanella sp. H8: ABIS04_06615
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Entry
ABIS04_06615 CDS
T10623
Name
(GenBank) ABC transporter substrate-binding protein
KO
K19226
cationic peptide transport system substrate-binding protein
Organism
sheh Shewanella sp. H8
Pathway
sheh01503
Cationic antimicrobial peptide (CAMP) resistance
sheh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABIS04_06615
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ABIS04_06615
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_06615
Transporters [BR:
sheh02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
ABIS04_06615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
XBJ49820
LinkDB
All DBs
Position
complement(1505645..1507270)
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AA seq
541 aa
AA seq
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MPVIVKRCYQLMSLCLSSIMLAACGPVQLPPGLVYCSEGNPESFNPQLVTSGTTIDATSY
QIYSRLVNYSQEKADITPGLATSWQVSDDGLSYQFTLREHVSFHRTDHFAPTRDFNADDV
LFSFNRIIDTLHPYHLVSRTGYPFFQSIGFAELIDSIEKVDDHQIIFHLVRKDASFLSNL
ATDFAVVLSAEYGYQLLAQGNPEDIDYYAVGTGPFQLSQYVKNEYIRYKKNPVYWGPTVE
LDQLVFDITPRSTARIAKLITGDCSVSALPKAGELAILDQHKDIIVDAKPGLNVAFWAFN
TQKPPLDDVRVRRALAHAIDKNNILDVVYNDTAVEASGVLPPASWAYSKNLSPNEYNPEK
AKALLQQAGISNLSINVWAMPVARIYNPSALKTAELIQADLARIGVKLNIISYDWSVFTQ
KLASSNYDSVLIGWNADNSDPDNFFTPLLSCAALASNNNRSRWCNKDFEHLLTQAQTVST
QPERKAFYQSAEAIISDQVPMVTFAHAKKIVLKKSNITTMKIRPYGGISFARTTQTIEGS
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttatagtaaaacgctgctatcagctgatgtctttatgtctctccagcatcatg
ttggcggcatgtggaccagtgcaattgcctccaggtcttgtgtattgcagtgaaggcaat
cccgaaagttttaacccacaacttgtgacatcgggcaccactattgatgctacctcatac
caaatttacagtcgattagttaactacagccaagaaaaagccgatattactcctggcttg
gcaacgtcatggcaggtatccgatgatggcttaagctatcaatttaccctgcgtgagcat
gtgagttttcatagaacggaccattttgcccccacaagagactttaatgccgacgatgtg
ctgttttcatttaatcgcatcattgatactttgcatccatatcatttagtcagtagaacg
ggttatccattttttcaaagcattggttttgccgaattaattgactccattgaaaaagta
gacgatcaccaaatcatcttccatctagtccgtaaagacgcatcttttttatcgaatctc
gccaccgatttcgcagtagtgctatcagcggaatacggttatcaacttttagcacaaggg
aaccctgaagacattgactactacgccgtaggcacaggaccttttcagttaagccaatat
gttaaaaatgaatatattcgctataaaaagaatccagtatattggggacccacggtcgag
ctcgatcaattagtatttgatattacgccaagaagtaccgcccgcattgccaaattaatt
actggtgactgtagtgtgtcagcattacccaaagccggtgagttagccatacttgaccaa
cataaagacattattgttgatgccaagcccggattaaacgttgccttctgggcctttaac
acccaaaagccgccattagatgatgtaagagtaagacgcgcactcgcacatgctatcgat
aaaaataatattcttgatgtggtttataacgataccgctgttgaggcctctggtgtttta
ccaccagcatcttgggcttattcaaaaaacttatctcctaatgaatacaaccccgaaaaa
gccaaagcattactgcaacaagcggggatatctaatttatcaattaatgtatgggccatg
ccagtggcgcgaatttataatcctagcgcactgaaaaccgcagaacttattcaagcggat
ttagcccgtattggggtcaagctgaatattattagctatgattggagtgtgtttactcaa
aaattagccagttctaattatgattcggtgctcattggttggaatgcagataacagcgat
ccagataacttttttaccccattattaagttgtgcagcgttagcctctaacaacaaccgc
tctcgatggtgtaacaaagattttgaacatttattaacacaggcacaaacggtatcaact
cagcctgaacgtaaagctttttatcagtccgctgaagccattattagcgatcaagttcct
atggtaacgtttgcccacgctaaaaaaattgtgttgaaaaagagtaatatcactacaatg
aaaattagaccttatggcggtatttcgtttgcccgaacaactcaaacaatagagggaagt
caataa
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