Shewanella sp. H8: ABIS04_07430
Help
Entry
ABIS04_07430 CDS
T10623
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sheh Shewanella sp. H8
Pathway
sheh03030
DNA replication
sheh03430
Mismatch repair
sheh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABIS04_07430 (dnaX)
03430 Mismatch repair
ABIS04_07430 (dnaX)
03440 Homologous recombination
ABIS04_07430 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sheh03032
]
ABIS04_07430 (dnaX)
03400 DNA repair and recombination proteins [BR:
sheh03400
]
ABIS04_07430 (dnaX)
Enzymes [BR:
sheh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABIS04_07430 (dnaX)
DNA replication proteins [BR:
sheh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABIS04_07430 (dnaX)
DNA repair and recombination proteins [BR:
sheh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABIS04_07430 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
ResIII
AAA_7
AAA_assoc_2
PIF1
AAA_18
RCF1-5-like_lid
AAA_2
TsaE
SchA_CurD
Motif
Other DBs
NCBI-ProteinID:
XBJ49970
LinkDB
All DBs
Position
1706323..1709160
Genome browser
AA seq
945 aa
AA seq
DB search
MSYQVLARKWRPAKFEQMVGQSHVLMALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCETGITANPCGKCSSCIEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPHKLPVTVLSRCLQFNLKSLSQ
DEISKQLEYVITQEQLPFEQQALSLLAKAANGSMRDALSLTDQAIAFGSGQVMLTQVQTM
LGSIDEQHVLALLKALCDAEVGPLMQTVAKVLAFGADAEEVLRSLLELLHQITLTQFAPA
AAQQSLFSEQILAFAQQLAPEQVQLYYQMLLNGRKDLPFAPDPKSGLEMALLRAVAFTPE
KQVKRWVTTTPANIDLSVIDHSSPPGQEVNETGPKSALQSKVDTLPSSSSTAPVKIVSTV
DLEKQDSDIVDDESVIASLVDEQTLVMSQAQSLGFNSSSPQSDVVQAEPATAVEANHVIE
QAEHQETSDAKDVDAKTEANLDVTASANLSTEHGNQPTSDQNSEQQSAVSTANTNDVEKS
DNVDDSLSAYAFMDYDTSGDASMEYEPLDHDEYMAFSALNEATEANNIGNVTDAVQKPQR
ISDDIDNINDDSRDIVNKQNSDIIDHGTNQELTRSEDTADDFLDEVLASRDLLIADVGAL
HLKEELAKKEPAKVITPRKVKPVSTPVTAANESSVGSVEAKPSSVTEEQAIVDYDRPPWV
KPKEDEQVNTFADINEDIKPAVEATIQQPSTNSHPIDNQHQKPASTLTTSSLAANPLNMS
VEPATTQSHEVTAFEPHSIQGDEVDLHWYKVMTNVSVGGRVRQLGVNSVCSALSNPMVLV
LKPNQKHLSAQTAIEQLQQALSEYLEQPTEVQIQIGVVPERETPLELRKRFHRELIAQAQ
QSILIDDNVKWMVQRLSAQLDSDSIEYPAEQLGQIAQEIALINAS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaagtactcgcccgcaaatggcgcccagctaaatttgaacaaatggttggt
cagtcccatgtattaatggcattaaccaatgcattgagtcaacaacgtttacatcatgct
tatttgtttactggaacccgcggtgtgggtaaaacaagtttggcgcgtttatttgctaaa
ggcctcaattgtgaaacgggtataacggctaatccatgcggtaaatgttctagttgcatt
gaaattgcccaaggtcgctttgtcgatttaattgaagttgacgcggcgtcgcgtaccaaa
gtcgacgatactcgtgaacttctcgacaatgtacagtaccgtccatcccgtggtcgtttt
aaggtgtacttaattgatgaagtacatatgttgtcgcgcagcagttttaacgcactgcta
aagacattagaagaacctccagagcatgttaagtttttattagcgactaccgatccgcac
aaactgcctgttactgtgttatctcgttgcttacagttcaatttaaaaagtttgtcgcaa
gatgaaatcagcaagcaacttgaatatgtcatcacccaagaacaattaccctttgagcag
caagcactgagtttattagctaaagcggctaatggcagtatgcgtgatgcgctcagttta
acggatcaagcgatagcatttggcagtggccaagtgatgcttacacaagtgcaaaccatg
ttgggcagtattgatgagcaacatgtgttagcgttattaaaagccttgtgtgacgctgag
gttgggccattaatgcagacggtggccaaagtattggcatttggtgcagatgcagaagaa
gtactgcgaagcctgttagagctattacatcaaatcaccttgacgcaatttgcaccagcc
gcggcacaacaatcgctgtttagtgagcaaatattagcgttcgcgcagcaattagcgccg
gaacaagtccagctttattaccaaatgttacttaacggtcgtaaagatttaccctttgct
cccgatcctaaatctggcttggaaatggcgttacttcgagctgtagcctttaccccagaa
aaacaagtgaagcgttgggtaacaacgacacccgctaatattgatttaagcgttattgat
cattcatcacctccagggcaagaggtcaatgaaacaggcccaaagtcagctcttcaatct
aaagtagacactcttccatcttcttcgagcacagcgccggtgaaaattgtttcaacggta
gatcttgagaaacaagatagtgatattgtcgacgatgaatctgttatagcctcactggta
gacgaacaaactttggtcatgagtcaagcacaaagcttaggctttaacagctcatcgcca
caaagcgatgtagtgcaggctgaacccgctactgcagtagaggctaatcatgtcattgag
caagccgagcatcaagagactagcgatgcgaaagatgtagatgccaagactgaagctaat
cttgatgtaacggcttcggcgaacctcagcactgaacatggtaaccagccaacctctgat
caaaatagtgaacaacaatctgcagtgagtactgcaaacaccaatgacgtagaaaaaagt
gacaatgttgatgattcgctaagtgcatatgcttttatggattatgacacctcaggtgat
gcatcaatggaatatgagccactagatcatgacgagtatatggctttttcggctttaaat
gaggcaactgaagctaacaatattggtaacgttactgatgctgtacaaaagccacaacgg
ataagtgatgacattgacaatatcaacgatgatagtcgtgatattgtgaataaacaaaac
tctgacattattgaccatgggactaatcaagaactcactcgttctgaggatactgcagac
gactttcttgatgaggtgttagctagccgtgatttactcatagcggatgtaggggcattg
catttaaaagaagaacttgccaaaaaagagccagcaaaagtcattacacctagaaaagta
aaaccggtatcgacacccgttactgcggctaatgaatcatctgttggatctgtagaggca
aagccaagctctgtaacggaagagcaggcaatagtcgattatgatagaccgccttgggtt
aagcctaaggaggatgagcaagttaacacgtttgccgatatcaatgaggatatcaaacct
gctgttgaagcaactattcaacaaccgagtacaaacagtcatccaatcgataatcagcat
caaaagcctgctagcactctcactacaagttcgttggcggctaatccgctgaacatgagt
gttgaacctgcaacaactcaatcccatgaggttactgcatttgaaccacacagtattcaa
ggtgatgaggttgatttgcattggtataaagtgatgacgaatgtgtctgttggcggtagg
gttagacaactaggtgtaaactcagtgtgctcagcattgtcaaatcccatggtgttggta
ttgaaacccaatcaaaaacatttgtcagctcaaacggcgatcgaacaattgcaacaggcg
ttatctgaatatctcgagcaaccgacagaagttcaaattcagataggggttgtgcctgaa
cgtgaaacgccactagagttacgtaaacgttttcatcgtgagcttattgcacaagcacaa
cagtctattttgatagatgataacgttaagtggatggttcagcgtttatccgctcaatta
gacagtgacagtattgaatatccggcagaacaattggggcaaatagcacaagaaattgca
ctcattaatgcttcataa
DBGET
integrated database retrieval system
