Shewanella sp. H8: ABIS04_07955
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Entry
ABIS04_07955 CDS
T10623
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sheh03009
]
ABIS04_07955 (rlmA)
Enzymes [BR:
sheh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
ABIS04_07955 (rlmA)
Ribosome biogenesis [BR:
sheh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ABIS04_07955 (rlmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Ubie_methyltran
Methyltransf_32
Methyltransf_23
MTS
Methyltransf_29
Methyltransf_9
RrnaAD
MetW
DREV
PCMT
CheR
Auto_anti-p27
Methyltransf_36
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
XBJ50055
LinkDB
All DBs
Position
1828729..1829550
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AA seq
273 aa
AA seq
DB search
MSYICPICNAPLVQKQNTWQCEQRHQFDCAKEGYVNLLPVQKKKTKDPGDNKEMMLARRE
FLNQGFYQPLSDKVNQLALEYTSEAQKILDIGCGEGYYSHRLFETLQSVVKPNCELYGLD
ISKSAIRYAAKRYSALHFCVASAFEMPFADDSFDLAIRIYAPSKIEELQRVIKPGGILIT
VSPGPMHHYALKQKIYSEPKLHPQEPMVLDGFTYLVHQALAYPLTLTRAEDIDHFLNMTP
YAWKLSDSQKAQIIEQGLECEIDFKIEIHQREQ
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatatttgccctatttgtaacgccccattagtacaaaaacagaacacttggcaa
tgtgaacagcgccatcaatttgattgtgctaaagaaggttacgttaatttattgcctgta
caaaaaaagaaaactaaagatcccggcgataacaaagaaatgatgctcgccagacgagag
tttcttaatcaaggcttttatcaacccttaagcgataaagttaatcagttagcgcttgag
tacacgagtgaggcacaaaaaatactcgatatcggttgtggcgaaggatattacagccat
cgattattcgaaacgctacagtcggtggtaaaacccaattgtgagctttatggacttgat
atttctaagtctgcaattcgttatgcggctaagcgctactcagcattacatttttgtgtg
gcgagtgcttttgaaatgcctttcgctgatgatagttttgatttagccatccgtatttat
gcgccgtctaaaattgaagagttacagcgtgtaatcaaaccgggtggaatactcattact
gtttctcctggaccgatgcatcactatgctttaaaacaaaaaatttatagtgaacctaaa
ttgcacccacaagaacctatggtgttagatggttttacttacttagttcaccaagcgtta
gcctatccattaacattaactcgtgcggaagatattgatcactttcttaatatgactccc
tacgcttggaagttaagtgactcacagaaggcacagataatagagcaaggactcgagtgt
gagatagatttcaaaattgaaattcatcaacgcgaacaataa
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