Shewanella sp. H8: ABIS04_08155
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Entry
ABIS04_08155 CDS
T10623
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sheh Shewanella sp. H8
Brite
Enzymes [BR:
sheh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ABIS04_08155 (rnd)
Transfer RNA biogenesis [BR:
sheh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABIS04_08155 (rnd)
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NCBI-ProteinID:
XBJ50092
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Position
1869585..1870697
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AA seq
370 aa
AA seq
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MLTFEYISDNASLLSLVEQYQQSTLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPVA
ITDLSPFWKLLTDPKIVKLVHSCSEDLEVFAHYGDCQPNPLFDSQIAASLSGLGYGLGYA
KLAETCLQVEIDKGESRTDWMKRPLSDAQLQYAANDVYYLYQLYPQLQEKLAANNRLEWL
FEESQRMTEGRLSLPEGDSVYLKVKNAFQLSSPQLAYLKVLAKWRLNKAVSRNLALGFVV
KDHALIALAKKQPTTLAELSSLNDLTEQEKRIHGKELLTVMATADLTNLPEEVDVVALKS
GYKSAFKEIKTTLIELCEREDVALEFVGSKRHIHEFLLWLYHNKQTPTPLLLTGWRGQLI
GDLLADVRFS
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
ttgttaacgtttgaatatatcagtgataacgccagcttattatcattagttgaacaatac
caacaaagcaccttattggtgctcgatactgaatttgtccgcactcgtacttactatgca
aaattggggcttattcaagcttacgatgggaaaacattggctttgatagatcctgttgcc
attacagatcttagcccattttggaagttattgactgatcctaagattgttaaattagta
cattcttgtagtgaagatcttgaagtgtttgctcattatggtgactgtcaaccaaacccg
ctttttgacagtcaaattgctgctagtctatctgggttggggtatggcttaggttatgcc
aaattagctgaaacctgtttacaagttgaaattgataaaggcgaatcgcgtaccgactgg
atgaaacgccccttgtcggatgcacaattacagtatgcggctaatgatgtgtattatttg
taccaattatacccacagttacaagagaagcttgctgccaataatcgcctagaatggttg
tttgaagaaagccaacgtatgacagaagggcgtttatcattaccagaaggtgacagtgtt
taccttaaagtaaaaaatgctttccagttatcgagcccacagttagcttacttaaaagta
ttggctaaatggcgcttaaacaaggcggtaagtcgtaatctcgcgcttggttttgtggta
aaggaccatgcattaattgcattagccaaaaaacaaccgaccacattagcagaattaagt
agtttaaatgatttaactgagcaagagaaacgcattcatggcaaagagttattaacggta
atggcaacagccgatttaactaatttacccgaagaagtcgatgttgttgcacttaaatct
ggttataaatcggcatttaaagaaattaaaacaacattaattgaattgtgtgaacgtgaa
gatgttgcattagagtttgtgggatctaaacgccatattcatgaatttttactctggttg
tatcacaataaacaaacgccgacgccgctattgctaacggggtggcgaggtcaacttatt
ggagacttacttgcagatgtgcgttttagttaa
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