Shewanella sp. H8: ABIS04_08360
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Entry
ABIS04_08360 CDS
T10623
Symbol
trmY
Name
(GenBank) tRNA (pseudouridine(54)-N(1))-methyltransferase TrmY
KO
K16317
tRNA (pseudouridine54-N1)-methyltransferase [EC:
2.1.1.257
]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_08360 (trmY)
Enzymes [BR:
sheh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.257 tRNA (pseudouridine54-N1)-methyltransferase
ABIS04_08360 (trmY)
Transfer RNA biogenesis [BR:
sheh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ABIS04_08360 (trmY)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrn_RNA_2
Motif
Other DBs
NCBI-ProteinID:
XBJ50130
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All DBs
Position
complement(1910709..1911305)
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AA seq
198 aa
AA seq
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MRAFVVRARAAPVDSQQFLAGIGHEAHTEILAHTLMNTIFVAQSHRDDVVVYLVLESTQD
YSRTICFRSSELGHIGGFHEQNLTNKIAKALTASKGMTKEQLREVEPGITVRTVSFEKLI
QELAEDYQLYMLEKKGTPVRDIEFAANPCFLLTDHIPMPKKSFNSLKRLGTQHINLGPRM
LFASQCVVLIHNELDMRL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcttttgtcgttcgagccagagctgctccagttgatagtcagcaatttttggcg
ggtataggccatgaggctcacactgaaattttagctcataccttaatgaatactattttt
gtcgcccaatctcatcgtgacgatgtggtggtgtatttagtgctagaaagtacccaagat
tattcacgcacaatctgctttcgttccagtgagctaggtcatatcggcggatttcacgag
caaaatcttactaataaaattgccaaagcattaacagcatcaaagggcatgactaaagaa
caattgcgtgaagttgagcctggcattacggtgcgcactgtgagttttgaaaagttaatc
caagagctagccgaagattatcagctgtatatgttagagaaaaaaggcaccccagtgcga
gatattgagtttgctgccaatccttgttttctactgactgatcatatcccaatgcctaaa
aagagctttaacagcttaaaacgtctcggcacccaacacattaatttgggccctagaatg
ttgttcgcatcacagtgcgtggtgttgatccacaatgagttagatatgagattgtag
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