Shewanella sp. H8: ABIS04_08475
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Entry
ABIS04_08475 CDS
T10623
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABIS04_08475 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sheh01007
]
ABIS04_08475 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_08475 (serS)
Enzymes [BR:
sheh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ABIS04_08475 (serS)
Amino acid related enzymes [BR:
sheh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ABIS04_08475 (serS)
Transfer RNA biogenesis [BR:
sheh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABIS04_08475 (serS)
Prokaryotic type
ABIS04_08475 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
FlgN
Vps53_N
HAUS5
Motif
Other DBs
NCBI-ProteinID:
XBJ50150
LinkDB
All DBs
Position
1941433..1942719
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AA seq
428 aa
AA seq
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MLDPKFLRNELEITAERLATRGFILDVDNLTKLEEKRKSLQVATEDLQASRNAISKSIGQ
AKARGEDTSSIMAQVGDLGAQLDAKKAELAELLQQIQSLAMSMPNLPDESVPIGADENDN
VEVRRWGTPKEFDFEVKDHLDLGEALGGLDFKSAVKITGSRFIVMRGQIARLNRAIGQFM
LDLHTTEHGYTECYVPLLVNEESLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNYVRDMIVDESELPMKMTALTSCFRSEAGSYGRDTRGLIRQHQFDKVELVQIAHPDNSM
QALDDITANAERVLQLLDLPYRTMVLCTGDMGFGSSKTFDIEVWLPAQNTYREISSCSNM
KDFQARRMQARYRSKIDNKPALLHTLNGSGLAVGRTLVAVLENYQNQDGTITVPSVLRPY
MGGLSVIG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctagatccaaaatttttgcgtaatgaacttgaaatcaccgctgagcgtttagccact
cgtggctttattcttgatgtcgataatttgaccaagcttgaagaaaagcgtaaatcgctt
caggttgctacagaagacttacaagcgtcgcgtaatgcgatatcgaagtcgattggtcaa
gctaaagcacgcggcgaagatactagttcgattatggcgcaagtgggtgatttaggtgca
cagctagatgctaaaaaagctgagctggcagagttgttacaacaaattcaaagcttagcg
atgagcatgccaaatttgccagatgaatcagtacccattggtgcagatgaaaatgacaat
gttgaagtacgtcgttggggcacacctaaggaattcgattttgaagtcaaagatcatctc
gatcttggtgaagcgttaggcggattagattttaaaagcgcggtaaaaattaccggttca
cgctttattgttatgcgggggcaaattgcccgtttaaatcgtgccattggccagtttatg
ttagacctgcacaccactgaacatggttatactgaatgctatgtgccgttattggttaat
gaagaaagcttgttgggcacagggcaattacctaagtttggtgaagacttattccacact
aaacctgctacagaagaaggccaaggtctttcacttattccaaccgctgaagtgccgtta
actaactacgtgcgcgacatgatagtggatgaaagcgaactgccaatgaaaatgacagcc
ttaacgtcatgttttagaagtgaagcgggctcttatggtcgtgatacccgtggtttgatc
cgccagcatcaatttgacaaagtagaattagtacaaattgctcacccagataattcaatg
caagccctagacgacattactgccaatgcagaaagagtattgcagttgttagatttacca
taccgcactatggtgttatgtactggtgatatgggctttggctcaagcaaaacctttgat
attgaagtatggttaccggcgcaaaatacttaccgtgaaatttcatcttgttcaaacatg
aaagatttccaagcgcgtagaatgcaagctagatatcgcagtaaaatcgataacaagcct
gctttattgcacaccttaaatggttctggtttagcggtcggccgtacattagtggctgta
cttgaaaattatcaaaatcaagatggcaccattacagtaccaagcgttttacgtccatac
atgggcgggttaagtgtgattggctaa
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