Shewanella sp. H8: ABIS04_09105
Help
Entry
ABIS04_09105 CDS
T10623
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_09105
Transporters [BR:
sheh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
ABIS04_09105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Peptidase_M23
OEP
FapA
DUF4349
DASH_Spc34
DUF4330
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
XBJ50271
LinkDB
All DBs
Position
2095019..2096212
Genome browser
AA seq
397 aa
AA seq
DB search
MKKTSIKKLTLLIVVIILIIAGGAYFVFDSDSSAPNYATESVQRGNIENSVLANGMLQAS
KLVSVGAQASGQIINLPVALGQQVKQGELIAQIDSLTQQNTLKEAIASLTSNEAQYRAKQ
AQINQAQQEFNRQKAMLANNASSKADYESAQATLLVYQAELDQLKAQQEQVKLSVESAQL
NLGYTTIKAPMDGMVVYTAVTVGQTVNSSQSTPTIVELADLSKMTIKAQISEADVIKVKP
GQAVYFTILGQPQKRFNATLRAIEPGPTIMDGDDSNMTSSDTDAIYYNGLFDVENPDGIL
RIGMTAQVSIILEQAEDVILVPSQILQSNHGKRSGFRVPVLVNDEIEYRNVTVGINNIVN
TEITKGLEEGDQIVLGAGGSTDTFSTRRGNRRPPMGF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaccagtataaaaaaactgactctcctgatcgttgtcataatactcattatc
gcaggcggcgcatattttgtttttgacagcgatagctctgcgcctaattatgcgacagag
tcggtccaacgtggcaatattgaaaacagtgtgttggctaacggcatgcttcaagcgtct
aaattggtgagtgtaggcgcacaggcttctggccaaattatcaatttacctgtcgcacta
ggtcagcaggtaaaacaaggtgagttaattgctcaaattgacagtttaactcagcaaaat
accttgaaagaagccattgcctcactgacaagtaatgaagctcaataccgagcaaagcaa
gcgcagataaaccaagctcaacaagaatttaatcgccaaaaagcgatgttagccaacaat
gcgagctcaaaagcagattatgagtcagcacaagctacgctattggtatatcaagctgaa
ctcgatcagctaaaggctcaacaagaacaggtcaaacttagtgtagaaagcgcacaacta
aaccttggctataccacaattaaagccccaatggacggcatggtggtctataccgctgtc
acagtggggcaaactgttaactcatctcaatcaactccaaccatcgttgagctagctgac
ttaagtaaaatgacgattaaagcacaaatttctgaagccgatgttattaaagttaagccc
gggcaagcggtctactttaccattttgggtcagccacaaaaacgcttcaacgcgacctta
cgcgccattgaaccagggccgactattatggatggcgacgatagcaacatgacctcaagt
gatacagatgctatttattataatgggctgtttgatgtagaaaaccctgacggtattttg
cgtattggtatgaccgcgcaagtctctattattcttgagcaggccgaagatgtgatttta
gtgccatcgcaaatactgcaatctaatcatgggaaaagatctggctttagggtaccggtt
ttagttaatgatgaaattgaatatcgtaatgtcactgttgggatcaacaatatagtgaat
actgaaattacgaaagggcttgaagaaggcgatcaaatcgtactcggggcaggaggttca
accgatacttttagtacccgtagaggcaatcgccgtccaccgatgggattttaa
DBGET
integrated database retrieval system
