Shewanella sp. H8: ABIS04_09110
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Entry
ABIS04_09110 CDS
T10623
Name
(GenBank) MacB family efflux pump subunit
KO
K05685
macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
Organism
sheh Shewanella sp. H8
Pathway
sheh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABIS04_09110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sheh02000
]
ABIS04_09110
Transporters [BR:
sheh02000
]
ABC transporters, eukaryotic type
Other subfamilies
Macrolide exporter
ABIS04_09110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MacB_PCD
ABC_tran
FtsX
ABC2_membrane_3
SMC_N
AAA_16
AAA_21
AAA_29
RsgA_GTPase
nSTAND1
AAA_22
AAA_23
MMR_HSR1
FtsK_SpoIIIE
AAA_15
DUF87
AAA_25
nSTAND3
Glyco_transf_4
AAA_28
AAA_13
Motif
Other DBs
NCBI-ProteinID:
XBJ50272
LinkDB
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Position
2096216..2098159
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AA seq
647 aa
AA seq
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MNESSLLNISGVYRSFSAGEQQLTVLNDINLDIKRGEMVAIVGASGSGKSTLMNILGCLD
KPSKGQYFINGQDTSTMDADQLAQLRREHFGFIFQRYHLLGDLDAVGNVEIPAIYAGKDK
KKRTERAQGLLSRLGLADRLDHKPGQLSGGQQQRVSVARALMNGGDVILADEPTGALDSH
SGKEMMDLLQELHQDGHTIILVTHDMDVANFADRIIELKDGVIIRDVENKQSTPHKALPE
VSTPITSWLNLDRYIEAFKMALIAMLSHRLRTFLTMLGIIIGIASVVSVVALGAGSQQSV
LENISAMGTNTIDVRSGSGFGDRRAAKIRTLTAQDSESLKVLPYVDSVTPSISSSGTIRY
GNQAVSASFSGVGVDYFRVRGYSLADGQFWNDTSETEMAQQAVIDDNTRKSLFSDSSAIG
EVIFLNDLPVRIIGVTKAQESAFGISDSLNVWVPYTTVSARMVGQQYLDSITVRINESAP
SSAAEQGIIALLKMRHGTEDFYTINTDTIRESIEKTSQTMTLLISAIAVISLIVGGIGVM
NIMLVSVTERTREIGVRMAVGARQSDILLQFLIEAVLVCLCGGAVGIGLAYLIGQIFAIT
GGSFQMIYSTASIVAAFACSTLIGILFGFLPARNAAQLDPVDALARE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcttctttacttaatatctcaggtgtttaccgctcttttagtgcgggcgag
caacaactcaccgtactcaatgacattaatctcgacattaaacgaggcgaaatggtggcc
atcgtaggtgcctctggttcgggaaaatccaccttaatgaatattttaggctgtttagat
aaaccgtctaaaggtcaatatttcattaatggccaagatacttccaccatggatgcagac
caattagcgcaattacgccgcgaacattttggttttatctttcagcgttatcatttattg
ggcgatcttgatgccgtcggtaacgttgaaatccccgcaatttatgccggtaaagataaa
aaaaagcgcaccgaacgtgcccaaggtttattgtctcgtttaggccttgctgatcgactt
gaccataaacccggccaactcagtggcgggcagcaacaacgtgtcagtgtggcgcgagca
ctgatgaatggtggcgacgttatcttagccgacgaaccaacgggggcacttgatagccat
agcggtaaagagatgatggacttgctacaagagcttcatcaagatggtcacactattatc
ttagtgacccacgacatggacgttgccaattttgctgaccgaataattgaacttaaagat
ggtgttattattcgtgatgttgaaaataaacagtcaacaccacataaagcgttgccagag
gtaagcacgcccattacctcatggttaaacttggaccgttacatcgaagcctttaaaatg
gcattaatcgccatgttatcgcatcgattacgtacttttttaaccatgcttggcattatt
attggtattgcatctgtggtttctgtggtggcacttggagcaggttcgcaacaatccgtg
cttgaaaacatcagcgcgatgggaactaacactatcgatgttcgatctggtagcggtttt
ggcgacagacgtgcagccaaaatcagaaccttaacggctcaagacagtgaatcacttaaa
gtattgccctatgttgacagtgtcacaccctcaattagtagctcgggtactattcgttat
ggcaatcaagccgtttcagcgagtttcagtggtgtgggggttgactactttagagtacgt
ggatattcattagcggacggccaattttggaatgacaccagcgaaactgagatggcacag
caagctgtgattgacgacaacacacgtaagtcgttgttttctgatagttcagccatcggt
gaagtgatttttctcaatgacttaccggttcgtattattggtgtaactaaagcccaagaa
agtgcgtttggtatcagtgactcactcaatgtttgggtaccttatacaacggtatctgct
cgtatggtcggtcaacaatatcttgacagtattactgtgaggatcaatgaatcagcgcca
agcagtgctgcagagcaaggcataattgcactattaaaaatgcgccatggaaccgaagac
ttttacaccattaatacggatacaattcgagaaagcatcgaaaaaacctcgcaaactatg
acactactgatttcagcaattgcagtgatttcgcttattgtaggtggtattggagtgatg
aacattatgttggtgtctgttaccgaacgtactcgagaaatcggtgtgcgtatggccgtg
ggagcaaggcaaagcgatatattacttcaatttttaattgaggctgttttggtgtgtttg
tgtggtggtgctgttgggatcgggcttgcctacttaattggccaaatatttgccattacc
gggggaagttttcaaatgatttactctacagcatcgattgtcgctgcgtttgcctgttca
accttaattggtattttgtttggctttttaccggcccgcaatgccgcacaactcgaccct
gtagatgctttagcgagagaataa
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