Shewanella sp. H8: ABIS04_09430
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Entry
ABIS04_09430 CDS
T10623
Symbol
thrS
Name
(GenBank) threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABIS04_09430 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sheh01007
]
ABIS04_09430 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_09430 (thrS)
Enzymes [BR:
sheh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
ABIS04_09430 (thrS)
Amino acid related enzymes [BR:
sheh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ABIS04_09430 (thrS)
Transfer RNA biogenesis [BR:
sheh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABIS04_09430 (thrS)
Prokaryotic type
ABIS04_09430 (thrS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
WHD_MCM_arc
Motif
Other DBs
NCBI-ProteinID:
XBJ50332
LinkDB
All DBs
Position
2181966..2183894
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AA seq
642 aa
AA seq
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MPIITLPDGSKREFANPVSTLDVALDIGPGLAKACIAGRVNGELKDATDLITADSELAII
TAKDEEGVEILRHSCAHLLGHAIKQMWPETKMAIGPVIDNGFYYDIDLDHKLTHEDIEAL
EKRMMALAKTNYNVVKKVVSWQEAHDVFSERGEVYKVAILDENISKDATPALYHHEEYID
MCRGPHVPNMRFCQNFKLMSVAGAYWRGNSDNKMLQRIYGTAWADKKALKTHLVRLEEAA
KRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWSIFLELEKFIRQKLGQYTYQEVKGPLMMD
RVLWERSGHWDKYAEAMFTTNSENREYAIKPMNCPGHVQIFNQGLKSYRDLPLRMAEFGC
CHRNEPSGSLHGLMRVRGFTQDDAHVFCTDDQVQQEVSACIQMVYDTYATFGFENIVVKL
STRPEKRIGDDDMWDRAEDDLKQALTDNNIEFEILPGEGAFYGPKIEFTLHDCLDRAWQC
GTVQLDYALPTRLGATYVAEDNSRQTPVMIHRAILGSLERFIGILIEEYAGKFPTWLAPM
QVVVMNITDKQADYVEEIVKFFKDQGIRASFDLRNEKIGFKIREHTLKRVPYLLVVGDQE
MENKEVAVRTRDGIDLGKLKLEDFAAMIRQQISLRSLKLLEE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcctattattaccttgcctgatggcagcaaacgtgagtttgccaatcctgtatcgact
cttgatgttgcattagacatcggccctggtttagccaaggcgtgtatcgctggccgtgtt
aacggtgagcttaaagatgcaaccgacttaatcacagcagattcagagttagctatcatt
acggctaaagacgaagagggtgttgaaatccttcgccattcttgtgcacatttattaggt
cacgcgatcaaacaaatgtggccagaaaccaaaatggcaattggtccagttattgataac
ggattttactacgacatagatttagatcataagctgacccatgaagatattgaagcctta
gaaaagcgaatgatggctttagcgaaaactaattataacgtcgttaaaaaagtggtctct
tggcaagaagctcatgatgtattcagtgaacgtggcgaagtgtataaggttgctattctt
gatgaaaacatcagtaaagatgcaacacctgcactttatcaccacgaagaatatatcgac
atgtgtcgtggaccgcacgtaccaaacatgcgtttttgccaaaattttaaattaatgagt
gttgctggtgcctattggcgcggtaattcagataataaaatgctgcaacgtatatacggt
acagcatgggcagacaaaaaagcacttaaaacccatttagtccgcttagaagaagcagct
aaacgtgaccatcgtaaaattggtaaacaattagatttgtaccatatgcaagaagaagcg
ccaggaatggtgttttggcataacgatggttggagcatatttttagaacttgaaaaattt
atccgtcaaaaactaggtcaatacacttatcaagaagtgaaaggcccactgatgatggat
cgcgtgttatgggaacgttctggccattgggataaatacgcagaagccatgtttaccact
aacagtgaaaaccgtgaatatgcaattaagcctatgaactgcccaggccatgtacagatt
ttcaaccaagggttaaaatcttatcgtgacttaccattgcgtatggctgagtttggttgt
tgtcatcgtaacgagccatcaggttcattacatggcttaatgcgcgtacgtggatttact
caagacgacgctcacgtattctgtactgatgatcaagtccaacaagaagtcagtgcatgt
atccaaatggtatacgacacatacgctacatttggttttgaaaatatcgtggtaaaatta
tcaacacgccctgaaaagcgtattggtgatgacgacatgtgggaccgagctgaagacgat
ttaaagcaagcattaacagataataatattgaatttgaaatattacctggtgaaggtgct
ttttatggcccaaaaatcgaatttactttgcatgattgtttagatcgtgcatggcaatgt
ggtacagtacaacttgattatgcattaccgactcgtttaggtgctacttatgtagctgaa
gacaacagtcgccagactccggtgatgatacatcgtgcgattttaggttcattagaacgt
ttcatcggtatattgatagaagaatacgcaggtaaattcccaacatggcttgctccaatg
caagttgttgtaatgaatattaccgataaacaagctgattacgttgaagaaattgtaaaa
ttcttcaaagatcagggtattcgagcatcttttgacttgaggaatgagaaaataggcttt
aaaatacgcgaacacactttaaaacgtgtgccttatttgttggtcgttggtgatcaagaa
atggaaaataaggaagtagcggtgcgtacacgtgacggtatcgatttaggcaagttaaaa
ctagaagatttcgccgcgatgatacgtcaacaaatttcgctccgtagtctcaaattgttg
gaggaatag
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