Shewanella sp. H8: ABIS04_09650
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Entry
ABIS04_09650 CDS
T10623
Name
(GenBank) PhnD/SsuA/transferrin family substrate-binding protein
KO
K13040
two-component system, LuxR family, sensor histidine kinase TtrS [EC:
2.7.13.3
]
Organism
sheh Shewanella sp. H8
Pathway
sheh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABIS04_09650
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sheh01001
]
ABIS04_09650
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sheh02022
]
ABIS04_09650
Enzymes [BR:
sheh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
ABIS04_09650
Protein kinases [BR:
sheh01001
]
Histidine kinases
LuxR family [OT]
ABIS04_09650
Two-component system [BR:
sheh02022
]
LuxR family
TtrS-TtrR (tetrathionate respiration)
ABIS04_09650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phosphonate-bd
HATPase_c
HisKA
HATPase_c_5
Motif
Other DBs
NCBI-ProteinID:
XBJ50371
LinkDB
All DBs
Position
complement(2225124..2226977)
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AA seq
617 aa
AA seq
DB search
MRLKMWLMLMPAFLWTVAAQSIVLPDNIAPLVQQQTPRDVVPLVHYRVAVLANYGVAKSI
SRWQPLMNYLTQHVANASFEVVPLDFNHMNQQLLNGQVQFVVTNPGHYFNMSGDFPISWL
ATMKSDKHQGNTFAIGATIIVRSDSPFYTIEDLAEHSVVASDPNALGGYQAAMGLINSKG
YLTDHFFSNVTFVGFPLEPLIYHVRDGTADIAITPFCTFEQMVAQGYINADDFRVINDVT
PEGYDCAVSTPLYPNWSFASSDAVPLTVRTDITRALLSVSANHPASIVGQNGGWAAPISQ
FEVIKLFKQLDIESNQIPVYMQVWQWIKLNQKWGFGLLGLFFVSTIYHLWLEYRFRQKSE
NLLNTERQLKNKALQLARLQSAAILGEIGAGLAHELNQPIAAITQYSEGGMIKQANNTGL
DSVQYQLLEKIHQQSIRAGEIVHRIRGLLQRKNTEDTDFFVNEQLMVCLELLEHEFKTHN
IKLSTQLTRHDIKLTGDKVGFCQVLINVLKNAVDAMSEKDDPLQSTNRILIESHIEDNIL
QMKIYDNGIGLSCSAVEFKTTFFSTKENGLGLGLTICNDVIMQFGGNISLSKCEDEPDSP
WQTGCRVLITIPVSSNK
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgaaaatgtggttaatgttaatgccagcttttttatggactgtcgcagctcaa
agcattgtgctaccagacaacattgcgcctcttgttcaacagcaaacaccacgagatgtc
gtccctctggttcactaccgcgtggcggtattagccaattatggtgtggcaaaaagtatt
tctcgttggcaaccattaatgaactatttaacccagcatgttgccaatgcgagttttgag
gttgttccactcgatttcaatcacatgaaccagcagttattgaatggacaggtacagttt
gttgttaccaatcctgggcactatttcaatatgagtggcgatttcccaatttcatggttg
gcgaccatgaagagcgacaaacatcaaggcaacacatttgctatcggtgcaactattatt
gtccgcagtgacagcccattttataccattgaagatctagcagaacattcggtcgttgct
agtgatccaaatgcgttaggtggttaccaagccgcaatggggttaatcaattctaaaggc
tatttaaccgatcatttcttttcaaatgtgacgtttgtgggttttcctctggaaccatta
atttatcacgttcgtgatggtacggcagatattgctataacccctttttgtaccttcgag
cagatggtggctcaaggttatattaatgctgacgattttagagttattaatgatgttacg
ccagaaggttatgattgtgcagtcagtacacctttgtacccaaattggtcgtttgcttct
tctgatgcagttccattaacagtgagaacagatattacccgcgcattgctttctgttagt
gcaaatcatcccgcttctattgtgggccaaaatggtggttgggccgcacctattagtcaa
tttgaagtgatcaagttgtttaaacaacttgatattgagtcaaaccaaatcccagtatat
atgcaagtttggcaatggattaagttaaatcaaaagtggggctttggattattaggctta
ttttttgtttcaacaatttatcatctatggcttgagtatcgatttagacaaaaaagtgaa
aatttattaaatacggaacgccaattaaaaaacaaggcattacagttagcccgattacaa
agtgccgctattttaggagaaattggcgccggactggcccatgagcttaatcaacctatt
gcggcaataacacaatacagtgaaggcggtatgattaagcaggccaacaatactgggcta
gactccgtgcaatatcagttgcttgaaaaaatacatcaacaatctattcgtgcaggagaa
atagtacatagaattagaggcttattgcagagaaaaaacacagaagacacagattttttt
gtgaatgaacaactaatggtatgtctagagttactagagcatgaatttaaaacccacaat
atcaaactcagcacccaactaactcgtcacgacatcaaattaaccggtgacaaagttggc
ttttgccaagtgctaattaatgtcttaaaaaatgcagttgatgccatgtctgaaaaagat
gatccactgcaaagcacaaaccgaatactaattgagtcgcacattgaagataatatcctt
cagatgaagatttatgataatggtattggtttgagttgttctgcagttgagttcaaaact
acctttttctccactaaagaaaatggcttgggtttaggcctcaccatttgcaatgacgtc
ataatgcagtttggtggaaatatcagtttatctaaatgtgaagatgaacctgattcacct
tggcaaacgggttgccgagtattaattactataccggtaagctctaataaataa
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