Shewanella sp. H8: ABIS04_10445
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Entry
ABIS04_10445 CDS
T10623
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_10445 (cmoB)
Transfer RNA biogenesis [BR:
sheh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
ABIS04_10445 (cmoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_23
Methyltransf_31
CMAS
PCMT
Ubie_methyltran
PrmA
FtsJ
Motif
Other DBs
NCBI-ProteinID:
XBJ46931
LinkDB
All DBs
Position
2410916..2411908
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AA seq
330 aa
AA seq
DB search
MINFSSFYKDIADSNLQHWLETLPAILGKWQRDNNHGSLPKWEKVLNKLHYPQPDKVDFS
STVTIGTGEQLSPGQVEKLSNLLAVFQPWRKGPFIVHGIQIDTEWRSDWKWDRVKDYITP
LTNRTVLDVGCGSGYHMWRMLGAGATRVVGIDPSPLFLCQFEAIKRVAGNQHPIHLLPLG
IEELPALDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRVGGELVLETLVIDGDENAVLVPQ
DRYGKMNNVWFIPSVAALMLWLKKCEFINVRCVDIDITSLAEQRSTAWMKNESLVDYLDP
NDVSLTIEGYPAPKRAIIIATKNQPNHDLV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttcagttctttttataaagacattgccgattcaaatctgcagcattggctt
gaaacgctaccagcgattttagggaaatggcaacgagataataatcacgggagtttacct
aaatgggaaaaagtcctcaataaattgcattatccgcaacctgataaagttgattttagt
agtactgtcaccattggaaccggtgaacaactcagccctggacaagtagaaaaactttct
aatttgcttgctgttttccaaccatggcgtaaaggaccatttatagttcatggcattcaa
attgatactgaatggcgaagtgattggaaatgggatcgagttaaagattacatcacaccg
ttaacaaatcgtaccgtattggatgtcggttgtggtagtggctatcatatgtggcgaatg
ctgggtgcaggagcgactcgagttgtcggaatagatccgtcgcctttattcttatgtcag
tttgaagccattaaacgagtcgctggaaatcaacatccaatacatttactgcctctaggg
attgaagagttacccgctttagatgcctttgatacggtattctcaatgggggtcctatac
caccgtcggtctcctattgatcatttactacaattacgagatcaactccgcgttggtgga
gaattggtattagaaacattggtgattgatggcgatgagaatgcagtacttgtgccacaa
gatagatatggcaaaatgaacaacgtttggtttataccctctgtagcagccttaatgtta
tggttaaagaaatgtgagtttattaatgttcgttgcgttgacatcgatatcacctcgtta
gcagaacaacgcagcactgcttggatgaaaaatgaatctctagtcgattacctcgaccca
aatgatgtaagtttaaccattgaaggttatcctgcacccaaaagagccattatcattgca
accaagaaccaaccgaatcacgacttagtgtaa
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