Shewanella sp. H8: ABIS04_10995
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Entry
ABIS04_10995 CDS
T10623
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
ABIS04_10995
Enzymes [BR:
sheh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ABIS04_10995
Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ABIS04_10995
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
Glucosaminidase
DUF915
Motif
Other DBs
NCBI-ProteinID:
XBJ47035
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Position
complement(2537239..2538540)
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AA seq
433 aa
AA seq
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MTRKSRVAVFVASIILSCTVLSACAASAAPATSTPTTTLTSTPIPKAAALVKIADPIIPT
ESFAQCVVRLQQKARDAGISQHIIDTTVANLKYVPRVIELDNQQPEFTTTFGDYFDKRVT
PWRVEQGRKLMAKHHQLLSQLTKEYGVPGQYIVAFWGLETNFGGYKGSMPVLNSLATLAC
DPRRSDYFTGELLQALKLKQQYQFADSKMVGSWAGAMGHTQFMPTNYRKYAVDGDGDGIA
DLWNSEVDALTSAANFLQHLGWKADERWGREVLLPAHYSFAYLGGKQPLPLVKWRELDIK
KSNGQPLSTPDMQAALYLPAGHTGPAFLGYDNFNVIMRWNRSEFYAIAVGHLADRINGGA
ALTRAVPKQPRLSREIVTQLQQKLNNAGFDVGKPDGILGRNSVLGLQAFQKQNGLIADGF
PDQQTFTALGIKL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaccagaaaaagccgtgttgctgtatttgttgcttcaatcattttatcttgcacggtg
ttgagtgcttgtgctgcttcggcggctcctgcgacatcaacccctacaacgactctaaca
tcaacgccgatacccaaggctgctgctttggtcaagatcgccgaccccataataccgaca
gaaagttttgcccaatgtgtggtgcgattacaacaaaaagccagggatgcagggatttca
caacacattatagatactacggtagcaaacttaaaatatgtccctcgagtcattgagcta
gataatcaacagccagagtttaccaccacttttggggattactttgataaacgtgtgacc
ccttggcgagtcgagcaaggccgaaaattaatggctaaacatcatcaattgctaagccaa
ttaaccaaagaatatggcgttcctggtcagtatattgttgctttttgggggcttgaaact
aattttggtggttacaaaggcagtatgccagtacttaattcacttgctactttggcgtgc
gacccacgcagaagtgattattttactggagaactattacaagcattaaaattgaaacaa
caataccaatttgctgacagtaaaatggttggttcttgggctggcgctatgggccacact
caatttatgccaactaactatcgaaaatatgccgttgatggtgatggtgatggtattgcc
gatttatggaacagtgaggtggatgcattaacctcagcagcaaattttctacaacactta
ggttggaaagcggatgaacggtgggggcgtgaagtactgttgcctgctcattattcattt
gcttatttaggcggtaagcaaccgttgccattagtgaaatggcgtgagctggatataaag
aaatccaatgggcaaccactttctacaccagacatgcaggcggcattgtatttacctgct
gggcataccggacctgctttcttaggatatgacaactttaacgtgatcatgcgttggaat
cgttcagaattttatgccattgcagtagggcatttagccgaccgaatcaacggtggtgca
gcactcactcgtgcggtacctaaacaaccaagattaagccgggaaatagtaacgcaatta
caacaaaagctaaataatgcaggatttgatgtcggtaagcctgatggtattttgggccgt
aattcagtgttaggtttacaagcctttcaaaagcaaaatgggcttattgcagacggtttc
cccgatcaacaaacatttactgcgttaggtatcaaactatga
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