Shewanella sp. H8: ABIS04_12655
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Entry
ABIS04_12655 CDS
T10623
Symbol
rnhB
Name
(GenBank) ribonuclease HII
KO
K03470
ribonuclease HII [EC:
3.1.26.4
]
Organism
sheh Shewanella sp. H8
Pathway
sheh03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABIS04_12655 (rnhB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sheh03032
]
ABIS04_12655 (rnhB)
Enzymes [BR:
sheh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
ABIS04_12655 (rnhB)
DNA replication proteins [BR:
sheh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
ABIS04_12655 (rnhB)
Elongation factors (archaeal)
ABIS04_12655 (rnhB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
XBJ50512
LinkDB
All DBs
Position
complement(2925574..2926221)
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AA seq
215 aa
AA seq
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MTSSNNLPIVIKNISPEQVAVISQGVVAGVDEVGRGPLVGDVVTAAVILDPSKPIVGLND
SKKLSEKRRNALYQQIMDNALSVSIGRANPSEIDELNILHATMLAMQRAVAGLSIKPERV
LVDGNRVPEFGIASHAIIKGDGLVAAISAASIIAKVTRDAEMDTLDTQYPQYGFAKHKGY
PTKAHFEALALYGVLPEHRKSFKPVAERILLQDTL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctagcaataatctgcccatagtgattaaaaatatctctcctgaacaggtggcc
gttatttcacaaggtgtggttgccggtgttgatgaagttggacgtggcccattagttggt
gatgtggtgaccgcagcggtgatattagacccgagtaaaccgatagtaggccttaacgat
tctaaaaaactcagtgaaaagcgccgtaatgctttataccaacagattatggacaatgcg
ttaagtgttagtattggccgtgctaaccctagtgaaatagatgagctgaatattttacac
gccactatgttggcaatgcagcgggcagtggcggggttgtcgattaagcctgaacgagta
ttggttgatggtaatcgggtgccagagtttggtattgccagccatgcaataataaaaggt
gatggattagttgccgccatcagcgccgcatctattattgctaaagtgactcgtgatgca
gagatggatacgttagacactcaatatccacaatatggctttgctaaacacaaaggttat
ccaaccaaggcacattttgaagcgttagccttgtatggtgtgttacctgagcatcgtaaa
agtttcaaacctgttgcagaacgtattttgcttcaggataccttgtaa
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