Shewanella sp. H8: ABIS04_13600
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Entry
ABIS04_13600 CDS
T10623
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sheh03009
]
ABIS04_13600 (der)
Ribosome biogenesis [BR:
sheh03009
]
Prokaryotic type
GTPases
ABIS04_13600 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
AAA_22
SRP54
AAA_24
TniB
ABC_tran
NTPase_1
Ras
G-alpha
Motif
Other DBs
NCBI-ProteinID:
XBJ47514
LinkDB
All DBs
Position
complement(3148300..3149766)
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AA seq
488 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAFLAGYEFIVVDTGGI
DGSEEGIETKMAEQSLAAIEEADVVLFMTDARAGMTAADLAIAQHLRSRDKVTFVVANKV
DGIDADSACGEFWSLGLGEVYQMAAAQGRGVTNMIDYALTPYAEAMGIVRQLDEEGEQVE
REYTEEEAEAEQERLQNLPIKLAIIGKPNVGKSTLINRILGEERVVVYDEPGTTRDSIYI
PMSREGREYILIDTAGVRRRSKVNEVIEKFSVIKTLKAVEDANVVLLVIDAREGIAEQDL
GLLGFTLNAGRALVIAINKWDGIDQKVKDRVKSELDRRLGFIDFARIHFISALHGTGVGH
LYESIEEAYDSATRRVSTSMLTRVMQMSQDDHQPPLVNGRRVKLKYAHAGGYNPPIVVIH
GNQVKKLPDSYKRYMMNYFRRSLKVVGTPIQLRFHEGANPFEGRTEKLTVGQERRRKRAM
SHIRDRTK
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatccctgtagtggcccttgttgggcgacccaatgtcggtaaatcgacattatttaac
cgtcttactcgtactcgtgatgcgttagtcgctgattttcctggcttgacacgtgaccgt
aaatacggtcgtgcattcttagctggctacgagtttatcgttgttgatactggcggtatt
gatggcagtgaagaagggatcgaaaccaaaatggctgaacagtcattggccgcgattgaa
gaagctgatgtcgtattatttatgactgacgctcgtgcgggtatgacggctgccgattta
gcgattgctcagcatttacgtagccgtgacaaagtcacctttgttgttgctaataaagtt
gatggtattgatgccgattctgcttgtggtgagttttggtctttaggtctaggtgaagtc
tatcaaatggcagcggcgcaaggtcgtggtgtcactaacatgattgactatgcgttaacg
ccttatgctgaagctatgggtattgttcgccagcttgacgaagaaggcgagcaggttgaa
cgtgaatatactgaagaagaagctgaagcggaacaagaacgtttacaaaacttacccatt
aagctcgctattattggtaagcctaatgtgggtaaatcaacactgatcaaccgtatcctc
ggtgaagaacgtgttgttgtttatgatgaaccaggtaccacccgtgacagtatttacatt
ccgatgtctcgtgaaggtagagagtatatattaattgatacagcaggtgttcgtcgtcgc
agtaaagtaaatgaagttatcgagaaattctcggtaattaaaaccttgaaagcagttgag
gatgctaacgtagtcttgttagttatcgatgcgcgcgaaggtattgcagaacaagatctt
ggtttattaggttttaccttaaatgcaggtcgtgcattagttattgcgataaataagtgg
gacggtattgatcaaaaagtcaaagaccgtgttaaaagcgaacttgatcgccgtttaggt
tttatcgattttgcccgtattcactttatttcagcattacatggtactggcgttggtcac
ttatatgagtcaattgaagaagcctacgacagtgctactcgtcgtgtgagtacatcaatg
cttactcgtgtgatgcaaatgtcgcaagatgatcaccaaccaccattggttaatggtcgt
cgtgtgaagcttaaatatgctcacgctggcggttataatccaccaattgtggttattcat
ggtaaccaagttaagaagctacctgattcgtataagcgctatatgatgaactacttccgt
cgttcattaaaagtggttggtacaccaattcagttacgtttccatgaaggtgctaacccg
tttgaaggcagaaccgagaaattgaccgtaggtcaagagcgtcgtcgtaagcgtgctatg
agccatattcgcgatcgtactaaataa
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