Shewanella sp. H8: ABIS04_13615
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Entry
ABIS04_13615 CDS
T10623
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABIS04_13615 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sheh01007
]
ABIS04_13615 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sheh03016
]
ABIS04_13615 (hisS)
Enzymes [BR:
sheh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
ABIS04_13615 (hisS)
Amino acid related enzymes [BR:
sheh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABIS04_13615 (hisS)
Transfer RNA biogenesis [BR:
sheh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABIS04_13615 (hisS)
Prokaryotic type
ABIS04_13615 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2
XFP_C
Motif
Other DBs
NCBI-ProteinID:
XBJ47517
LinkDB
All DBs
Position
complement(3151765..3153039)
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AA seq
424 aa
AA seq
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MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVSAFGYSEIRTPIVESADLFKRSIGEVT
DIVEKEMYTFEDRNSDSLSLRPEGTASTVRAGNEHGLLYNQEQRLWYMGPMFRHERPQKG
RYRQFHQFGVEVYGIGSADIDAEVLMLSARLWDQLGIKEHVALELNTLGDSAERAAYRDA
LIAFLEQHKDKLDEDSQRRMYSNPLRVLDSKDQQVQAILGDAPALMDYLGEDSKTHFSTL
CELLDAVGIQYTINPRLVRGLDYYNRTVFEWVTTSLGSQGTVLAGGRYDGLVGQLGGKDT
PAVGFAMGLERIVLLLETLELTSDIAAEVDVYVTAMGNNCEVEAIKVAQELRQQLPTLKV
MSHCGGGNFKKQMKRADKSGAQFALIIGENEIANNQVAIKPLRTNNEQLLVTRAELVAKI
AELI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaagcaaatccaagctattcgcggcatgaatgacattctgccaacgcaaagtcct
ttatggcaaaaagttgaagctgtattgcgttcatctgtaagtgcatttggctatagcgaa
attcgtacccctattgtagaaagtgccgacctttttaagcgctctattggtgaagtgacc
gatattgttgaaaaagaaatgtacacttttgaagaccgtaacagtgacagtttaagcttg
cgtccagaaggcactgcttcaacagtgcgcgcaggtaatgagcacggcttactttataac
caagaacaacgtttatggtatatggggccaatgtttcgtcatgagcgcccacaaaaaggc
cgttaccgtcaattccaccaatttggtgttgaagtctacggtatcggcagtgctgatatt
gatgctgaagtattaatgttatctgctcgtttatgggaccaattaggcataaaagaacat
gtagcattagagcttaatacgctaggcgattctgcggagcgtgctgcttatcgtgatgcc
ttaattgcttttttagagcagcataaagacaaactcgatgaagatagccaacgccggatg
tattcaaatccattgcgggtgcttgacagtaaagaccagcaggtgcaagccattttaggt
gatgcccctgcgttgatggactatcttggtgaagactccaagacacatttttcaactttg
tgtgaactcttagacgctgtaggcatccaatacaccatcaatcctcgtttagtgcgtggt
ttagattactataaccgtactgtattcgaatgggtaaccactagtttgggctcgcaaggt
actgtattggctggtggacgttacgatggtttagttggccaacttggtggtaaagatacg
cccgcagtgggttttgctatgggactagagcgtattgtattgctgcttgaaaccctcgaa
ctcactagtgacatagccgctgaagttgatgtttatgtcacagcaatgggtaataattgc
gaagttgaagcgattaaagtggcgcaagagttgcgtcaacagttgccaacgcttaaagtc
atgagccattgcggtggtggtaactttaaaaagcaaatgaaacgtgccgataaaagcggt
gcccagtttgcgttgattatcggtgaaaacgaaatagccaataatcaagtcgctattaag
ccgttaagaacaaacaacgaacaactattggttacgcgtgctgaactcgtagctaaaatt
gcagaactgatttaa
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