Shewanella sp. H8: ABIS04_13940
Help
Entry
ABIS04_13940 CDS
T10623
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00900
Terpenoid backbone biosynthesis
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ABIS04_13940 (ispF)
Enzymes [BR:
sheh01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
ABIS04_13940 (ispF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
XBJ47572
LinkDB
All DBs
Position
complement(3225295..3225774)
Genome browser
AA seq
159 aa
AA seq
DB search
MNIRIGHGFDVHKFGGDSPLVLGGVTVPYESGLIAHSDGDVVLHAISDAILGAMALGDIG
KHFPDTDVNFAGADSRVLLKHCYQLALQKQFVLGNLDVTIIAQAPKMAPHIEAMRQCLSV
DLQTDIDKINVKATTTEKLGFTGRKEGIAVEAVVLMKSQ
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcgtatcggtcatggttttgatgtacataaatttggcggtgatagcccactg
gttttaggtggtgttactgtcccttatgaaagtggactgattgcccattctgacggtgat
gtggtactgcatgccattagtgatgcgatattaggggcgatggcgttaggtgatataggc
aaacacttccctgatactgatgttaattttgccggtgcagatagtcgggtattattaaag
cactgttatcaacttgcactgcaaaagcagtttgtattaggtaacttagatgtcaccatt
attgctcaggcacctaaaatggcgccacatattgaggctatgcgtcaatgcttaagtgtt
gatttacagaccgacatagacaagattaatgttaaagcgaccactaccgagaagctgggt
tttacagggcgcaaagaaggcatcgctgttgaagctgttgtattaatgaaaagccaataa
DBGET
integrated database retrieval system
