KEGG   Shewanella sp. H8: ABIS04_14040
Entry
ABIS04_14040      CDS       T10623                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
sheh  Shewanella sp. H8
Pathway
sheh00740  Riboflavin metabolism
sheh01100  Metabolic pathways
sheh01110  Biosynthesis of secondary metabolites
sheh01240  Biosynthesis of cofactors
sheh02024  Quorum sensing
Module
sheh_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:sheh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    ABIS04_14040 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ABIS04_14040 (ribD)
Enzymes [BR:sheh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     ABIS04_14040 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     ABIS04_14040 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam HEAT_2
Other DBs
NCBI-ProteinID: XBJ47592
LinkDB
Position
complement(3247432..3248577)
AA seq 381 aa
MPNWSSFDIEMMSRAIMLAERGRYTTRPNPCVGCVIVADGQIIGEGFHQRAGQGHAEVNA
LQMAFDNGFSTEGATAYVTLEPCSHYGRTPPCALGLINAKVARVVVAVTDANPEVSGRGI
NMLRDADIQVDVGLLTEQAYALNLGFMKRMKTGVPWVTVKIAASLDGKTALSNGVSKWIT
GEAARADVQKYRASHCALITGVETILVDDPSLNVRYEALGELTTHHTKDEIFQPLRVVLD
SRARLTAAQQLFAIKSPILLVSGRHYADSVKATFPEHVSFLVLECDSSGRIPLLALLTYL
GENANAVLVEAGATLAGAFVAQNLADDIVLYQAPKLLGSHGRNMLQLPDYNAIEQIPALH
LIDERNVGQDKRYILRYNQPY
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgcctaactggtctagcttcgatattgaaatgatgagccgtgccattatgttggcagag
cggggacgttataccactcggcctaatccttgtgtgggatgtgtgattgttgctgatgga
cagattattggtgaaggttttcatcaacgagcaggccaagggcatgccgaagtcaatgct
cttcaaatggcgtttgataatggcttttctaccgaaggcgcgaccgcttatgtcactctt
gaaccttgtagtcattatggccgcacgccaccttgcgctttaggcttgataaacgccaag
gtagctagagttgtggttgctgttactgatgctaacccagaagtgtctggcagaggtatt
aacatgcttcgtgatgcagatattcaggttgatgtgggattactgacagaacaagcttat
gcccttaaccttggttttatgaagcggatgaagacaggagttccttgggttacggttaaa
atagccgccagtttagacggtaaaaccgcgttatctaatggggtatcaaagtggattacc
ggtgaagctgcacgagcagatgtacaaaagtatcgtgctagccattgcgcattaatcacc
ggtgttgaaaccattcttgttgatgatcctagcttaaatgttcgctatgaagcgttaggt
gaactaactactcatcataccaaagatgaaatattccaacctttaagagtggtgctcgat
agtcgagcaagattaactgcagctcaacagttgtttgcgattaaaagtccgatattgtta
gtttctggtcgtcattatgcagacagtgttaaagcgacatttcctgagcatgtgtctttt
ttagtattagagtgtgactcgtcaggtagaatcccgttattagccttgctaacgtattta
ggtgaaaatgctaatgctgtattggttgaagcgggcgccactttagctggggcatttgtc
gctcaaaacttagctgacgatatcgtactttatcaggcgcctaaactattaggcagccat
ggacggaatatgttgcagttacctgattataatgcaatagagcaaattcctgcattgcac
ttaattgatgagcgcaacgttggacaagataagcgatatatcctcagatataatcaacca
tattaa

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