Shewanella sp. H8: ABIS04_14050
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Entry
ABIS04_14050 CDS
T10623
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00260
Glycine, serine and threonine metabolism
sheh00460
Cyanoamino acid metabolism
sheh00630
Glyoxylate and dicarboxylate metabolism
sheh00670
One carbon pool by folate
sheh00680
Methane metabolism
sheh01100
Metabolic pathways
sheh01110
Biosynthesis of secondary metabolites
sheh01120
Microbial metabolism in diverse environments
sheh01200
Carbon metabolism
sheh01230
Biosynthesis of amino acids
sheh01240
Biosynthesis of cofactors
sheh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ABIS04_14050 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ABIS04_14050 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ABIS04_14050 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ABIS04_14050 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ABIS04_14050 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ABIS04_14050 (glyA)
Enzymes [BR:
sheh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ABIS04_14050 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
XBJ47594
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Position
complement(3249223..3250476)
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AA seq
417 aa
AA seq
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MLKKAMNIADYDPELFKAIEDETCRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDVVETLAIERAKELFGATYANVQPHSGSQANSAVFMALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDEMERLAIEHKPKMMIGGFSAFSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPTPVPHAHVVTSTTHKTLAGPRGGIII
SAADDEVLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVKNAKAMVE
VFLARGYKIVSGGTENHLMLVDLIGRDLTGKEADAALGNANITVNKNSVPNDPRSPFVTS
GIRIGSPAITRRGFKEAEAKELTGWICDILDDVSDTAVIERVKGQVLALCVKFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaaagcgatgaatattgcggattatgatccagaattatttaaagccattgaa
gacgaaacttgtcgtcaagaagaacacatcgaattgatcgcgtctgaaaactataccagt
ccacgtgtgatggaagcgcaaggttctcagttaaccaacaagtatgccgaaggttatcca
ggtaagcgttactatggtgggtgtgaattcgttgatgtggttgaaacattagcgattgaa
cgtgcaaaagaattatttggtgcaacttacgccaatgtgcagcctcattcaggctcacaa
gcaaacagcgctgtatttatggcgctattgcaaccaggtgataccgttttagggatgaac
ttggctcatggtggtcatttaactcacggttctccagttaacttctctggcaagctttat
aacattattccttacggtatcgatgagtctggcaaaattgactatgacgaaatggaacgc
ttagcaattgagcataagcctaagatgatgatcggcggtttctcagcgttttcaggaata
gttgattgggctaaaatgcgcgaaatcgctgataaaattggtgcgtacttatttgtcgat
atggcacacgttgcaggcttaattgctgctggtgtttatccaacaccagtcccacatgcc
catgtagttacgtctacaacacataaaacgttagctggcccacgcggcgggattatcatt
tctgcagccgatgacgaagtgttatacaaaaaacttaactcagcagtattcccaggtggc
caaggcggcccgttaatgcatgttatcgcgggtaaagcggttgcatttaaagaggcatta
gagccagagtttaaagtatatcaacaacaagtggttaaaaatgcaaaagctatggttgaa
gtgtttttagctcgcggttataaaatcgtctctggtggtacagaaaaccatttaatgttg
gtggatttaattggccgtgatttaacaggtaaagaagctgatgccgcattgggtaatgca
aacattactgttaacaaaaactcagtgccaaacgatccgcgttcaccgtttgttacttct
ggtatccgcattggttcaccggctattactcgtcgcggctttaaagaagctgaagcaaaa
gaattaaccggttggatttgcgatattttagatgatgtatctgataccgcagttattgag
cgcgttaaaggccaagtattggccttgtgtgttaaattccctgtatatggttaa
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