Shewanella sp. H8: ABIS04_14135
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Entry
ABIS04_14135 CDS
T10623
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sheh03400
]
ABIS04_14135 (radA)
DNA repair and recombination proteins [BR:
sheh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABIS04_14135 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
ChlI
Zn_ribbon_LapB
AAA_22
DnaB_C
Lon_C
DUF7125
nSTAND3
SLFN-g3_helicase
AAA
AAA_16
AAA_18
ABC_tran
ATPase_2
NPHP3_N
AAA_14
cobW
AAA_19
DUF5906
AAA_30
MMR_HSR1
AAA_11
Rad51
TsaE
Thymidylate_kin
NACHT
CobU
NTPase_1
ATP-synt_ab
Zeta_toxin
nSTAND_NTPase5
AAA_28
VapE-like_dom
Motif
Other DBs
NCBI-ProteinID:
XBJ47610
LinkDB
All DBs
Position
complement(3269978..3271357)
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AA seq
459 aa
AA seq
DB search
MAKAPKMTFVCDDCGQDYPRWQGQCRCGAWNSLVEMRLSASKSSTSRSSVLGYAGAVGGG
SKKLSEVESVEAEKRLTEIGELDRVLSGGLTTGSVNIISGDPGAGKTTLLSDLVARMSQS
MASLYCTAEESLSQFKNRVNRLKLNYNEDNLFLLSETSVEAIIEELEAKQIKFAVIDSIQ
AVVTDAANGSPGSPSQVKTAAQAFTQYCKKNNVTMFIIAHVNKNNEIAGPQTLVHIVDSL
LHIDTNDGQIRTLRANKNRFGDVDTVGIFRMSERGMLSVDNPSEIFLSGSTTESPGSTIT
CIRKGNRNLLLEIQCLTTETESEFPQRVCVGLNMNRIKMLTGILRKHTKTKIYHDTFFNI
VGGLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAA
QHGFTEIFIPFRNYHKTMEGLGAKITPVKTIHELLELIH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctccaaaaatgacatttgtttgtgacgattgtggtcaagattatccgcgt
tggcaggggcaatgtcgttgtggtgcgtggaactctttagttgaaatgaggttatcggca
tcaaagagttcaacctcgcgttcatcggtattgggctacgcaggtgctgttggtggcggt
tccaaaaagctgagtgaagttgaatctgtggaagctgaaaaaagactcactgaaattggt
gagttagacagagtattaagcggtggattaacaactggttctgttaatattatttcaggt
gatcctggtgcaggtaaaacaacgttgttatccgatttagttgctcgaatgtcgcaatca
atggcgtcgttgtactgtactgcagaagagtcattatcccaatttaagaatcgcgttaat
cgtttaaagcttaattataacgaagataacttgtttctgttgtctgaaaccagcgtagaa
gcgattattgaggaattagaagctaagcaaattaaatttgccgtaatcgattctattcaa
gcagtcgttacagatgctgcaaatgggagtccagggtcgccgtcgcaagttaaaacagct
gcacaagcgtttacgcaatactgtaaaaaaaataacgtgactatgtttattattgctcat
gtgaataaaaataatgaaatcgctggaccgcaaaccttagtccatattgtggattccttg
ctacatattgacactaatgatggccaaattcgtaccttacgagccaataaaaaccgtttt
ggtgatgtcgataccgtggggatttttcgtatgagtgagcgtggaatgctcagtgttgat
aaccctagcgaaatatttttatcgggctccaccacagaatcacccggttcgacaattacc
tgtattcgtaaaggtaatcgtaatttgttgttagaaatacaatgtttaacgactgaaact
gagtctgaatttccgcagcgtgtatgcgtcggtcttaacatgaaccgaattaagatgtta
acggggattttacgtaaacatactaaaaccaagatatatcatgatacttttttcaacatt
gtcggcggattgaaaattgatgaatcagaaacctgtattgatttagcgcttgttacggca
ttattgagcagcttaaatgactttgtggtgcctagaaccacttgtattatgggtgagttg
agtttgaacggcgatgtacgtccaattgacagtggtgttccaagggtaaaagaagctgca
cagcacgggtttacggagatttttattccatttcggaattaccataaaaccatggaaggg
ttaggcgccaaaatcactccggtaaaaactattcatgagctacttgagctcattcattaa
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