Shewanella sp. H8: ABIS04_15305
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Entry
ABIS04_15305 CDS
T10623
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sheh03009
]
ABIS04_15305
Ribosome biogenesis [BR:
sheh03009
]
Prokaryotic type
ribosomal protein modification factors
ABIS04_15305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
XBJ47824
LinkDB
All DBs
Position
complement(3554153..3556339)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTSDQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDISTENIKLSQNNIVDPEDRYNQIFQIQVELPEDISDKDRQGILRSIERCTVKKVVQT
GPEFKIETVDNLDANANAMLMGQPQGDENTFILGKDLPLEQTIKNMTGLLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEGNDSLPSGILDDYCLDIYNPDEELCGSHLIDTNSGNKDRGIC
TIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKYPSILAGIKGLEEQGFPIVVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFTGTSEEEASGLFGILEAMGKEVYIAEFTNLGASACRILVPEYSEVY
PVDDLIWDNTNKALNYREDILNLHSLSTKALGKLVNRLEESQLDNHTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEDAIELVGEFLQFNDNTVQRGLFYQAVNAVLEVTLDED
LELEHFIGNFNRMFGKDVMDNVVGSINGSVRFYGLSKTSMNLEGIEPHLRLIESYKKLHQ
ARKIKAGI
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaactttctcgataacttgagactcgaagctaaatttgacgacttt
accgtcacgtccgatcaacctattcgttataaaggtgatggttcagctcctagtcctttt
gattatttcttagcttcgtctgcgctgtgtgcggcttactttatcaaggtgtattgtaaa
gcccgagatatttcgactgaaaatatcaagttgtcgcaaaacaatattgttgatcctgaa
gaccgctataaccaaatatttcaaatccaggtggaattaccagaagatatttcggataaa
gatcgccaaggtattttacgttcaatcgaacgttgtaccgttaagaaagtggtacaaact
ggccctgagtttaaaattgaaaccgttgataacctcgatgcaaatgccaatgcaatgttg
atggggcaacctcaaggtgatgagaatacttttatcttgggtaaagacttaccgcttgaa
caaaccatcaaaaacatgactggcctattagctgatcttgggatgaagattgaaatctcc
tcttggcgaaacattgtgccaaacgtttggtctttgcatatccgtgatgctgcatcacca
atgtgttttactaacggtaaaggtgccactaaagaaagcgcattatgttcagcattaggt
gagttcattgagcgtctcaataataactttttttataatgatcaattctttggtactgaa
atcgcaaatagcgagtttgtacattatccaaatgaaaaatggtttgcactcgaaggtaat
gattcgttaccttcaggcattttagatgactattgcttagatatttataaccccgatgaa
gagttatgtggctcgcatctaattgatactaattctggcaataaagatcgtggtatttgt
actattccgtacacgcgccaatctgatggtgaaacagtttattttccgtcgaaccttatt
gaaaatttgtttttaagtaatgggatgagtgcaggtaataacttgcaagaagcccatgtt
cagtgtttatctgaaatttttgagcgtgcggtaaaacgtcaaatcattgaacaagaaata
gtgcttcctgatgtgccaatggcggtactagagaaatacccaagtattttagcgggtatt
aaagggcttgaagaacaggggttccctattgtagtgaaagatgcttcattaggcggccaa
ttccctgtcatgtgcgtaaccttgatgaaccctcgtaccggtggtgtctttgcctcgttt
ggtgcacatcctagctttgaagtggcattagagcgcagcttaaccgagttattacaaggt
cgcagttttgaaggcttaaacgatgtgccaaagccaacgtttaacagcatggcagtaact
gaaccagaaaactttgttgagcactttatcgattcaacaggggttatctcttggcgcttc
tttagtagtaagtttgattatgaattctgtgaatgggattttactggcactagtgaagaa
gaagccagcggtttattcggtatcttagaagccatgggcaaagaagtgtatattgccgaa
tttactaatttaggagcgtctgcttgtcgtattttagtgcctgaatattctgaagtgtat
ccagttgatgacttgatttgggacaataccaataaagccttaaactatcgtgaagacatt
ttaaacctgcattcattaagcactaaagcgttaggtaagctagttaatcgcttagaagaa
agccaattagataaccataccgatattcgcactttaatcggcattgtgttcgacgaaaac
actgtttggggccaattaactattatcgaattgaaaatcttgatttacctcgcgttagga
gcccatgaagatgccattgagttagtcggagagttcttgcagtttaacgacaatactgtg
caaagaggtttattctatcaagctgtgaacgcagtattagaggtgacgttagatgaggat
ttagagcttgagcactttattggcaactttaaccgtatgttcggtaaagatgtgatggac
aatgtggtaggttcgattaatggctcggtgcgtttttatggcctgagcaaaaccagcatg
aatttagaaggtatcgagccgcatctacgtttgattgaaagttacaagaaactgcaccaa
gcgcgtaaaattaaagctggaatataa
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