Shewanella sp. H8: ABIS04_15380
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Entry
ABIS04_15380 CDS
T10623
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sheh03110
]
ABIS04_15380 (clpB)
Chaperones and folding catalysts [BR:
sheh03110
]
Heat shock proteins
HSP100
ABIS04_15380 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
bpMoxR
AAA_18
ATPase_2
nSTAND3
AAA_24
TniB
IstB_IS21
AAA_7
DUF815
NBD_SMAX1
ABC_tran
AAA_3
NACHT
AAA_25
AAA_19
ATP_bind_1
DNA_pol3_delta2
DUF677
Motif
Other DBs
NCBI-ProteinID:
XBJ47834
LinkDB
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Position
complement(3570178..3572751)
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AA seq
857 aa
AA seq
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MRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDSGSIHSLLTQAGIRVSAL
RSAVSQALENLPQVEGTGGDVQLSQGLIRLLNLCDKLAQKRKDKYISSELFILAALENND
QLAKALKDAGATKELMEKTIEDMRGGQNVDDPNAEDQRQALKKFTVDLTERAEQGKLDPV
IGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVIVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAATMSHRYISDRKLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRAI
QLKLEEQALSKESDDASRKRLEFLQNELSDVESKVSEMNEIWHTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLASQAEMQDMTLLRNKVTEVEIAEVL
SKATGIPVSKMLEGEREKLLHMEAALHERVIGQNEAVEAVSNAIRRSRAGLADPQRPIGS
FLFLGPTGVGKTELCKALAKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTETVRRKPYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSDIIQEGFGHTSYEEMKAGVMNVVTQSFRPEFLNRIDESVVFHPLDEENIKHIASIQFE
LLRKRLLEKEFDIELSDEALTLIADAGFDPVYGARPLKRALQQEVENPLAQKLLRGELLP
GKMIKVVVKEGKLAFIQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagactcgatcgtatgactaataagtttcaaattgccatttccgatgctcaatcgtta
gccttggggcgcgaccatcaatttattgaacctattcatttaatgatggcgctattaaat
caagattccggttctattcattctttgctcacgcaagcggggattcgcgtcagcgcgctt
cgttcagctgttagccaagcgttagagaatttaccgcaggttgaaggtactggtggtgat
gttcagctgtcacaagggttaattcgtttattgaatctttgcgataaattagcccaaaag
cgtaaagataaatatatttcatcggaattgtttatcttagccgcattggaaaataatgat
cagcttgccaaggcattgaaagatgctggtgcgaccaaagaattaatggaaaaaaccatt
gaagatatgcgtggtggccagaatgtcgatgatcccaatgctgaagatcaacgccaagcg
ttgaaaaaatttactgtagatttaaccgaacgcgctgaacaagggaaattagaccctgtt
attggccgtgatgaagaaatccgccgtacgattcaagtattacaacgccgaacaaaaaat
aatccagtattaattggtgagcctggcgtgggtaaaacggctattgttgaaggtttagca
caacgtattgttaatggcgaagtccctgaaggaattaaaaataagcgtgttttatcattg
gatatgggcgcgttaattgcgggggctaaatatcgcggtgagttcgaagagcgcttaaaa
gcagtcctcaatgagctatcccaagaagaaggtcaggtcattctgtttatagatgagctg
catacaatggtcggcgcaggtaagggcgagggcgcaatggatgctggtaatatgcttaag
ccggcattagcgcgtggcgatctgcattgtgttggtgcaacaacgctagacgaataccgc
caatatattgagaaagatgccgcattagaacgtcgttttcaaaaagtgattgttgatgaa
ccgagtgttgaagataccattgctattttacgtggcttaaaagaacgttatgaattacat
catcatgtagagattactgatcctgctattgttgccgctgcaacaatgtcacatcgctat
atttcagatagaaaattaccagacaaagctatcgacttaatcgatgaagcggcatctagt
attagaatgcaaattgattctaaaccagaagcgctagatcgattagaacgtcgtgctatt
caactaaaactagaagagcaagcgttaagtaaagagtctgatgatgccagtcgtaaacgt
ctagagtttttacaaaatgaactgagtgatgttgaaagtaaagtctcagagatgaatgag
atttggcataccgaaaaagctgcactagctggaactcaacatattaaagccgaccttgaa
caagctagaatggacttggaagtggctcgacgtgctggggacttaacacgtatgtccgaa
ctacagtatgggcgtattcctgagcttgaaaaacagttggatttagcatctcaagcagaa
atgcaagatatgacattgctgcgtaataaagtcacggaagtagaaatcgctgaagtgtta
tcaaaagctaccggtattcctgtgtcgaaaatgctcgaaggtgaacgagaaaagctattg
cacatggaggctgcattacacgaacgtgttatcggtcaaaatgaggctgtcgaagcggta
tctaatgccattcgtcgtagtcgtgctggtcttgctgatcctcaacgtccaatcggatcc
tttttattccttggaccaactggtgtcggtaaaactgagctatgtaaagcgttagctaaa
ttcttattcgatactgaatccgcgttggtgcgtatcgacatgtctgaatttatggaaaaa
cactcagtgtcacgtttggtcggagcccctccaggatatgtaggttatgaagaaggaggg
tatttaaccgaaacagtacgccgtaaaccttactcagtgatattgttagacgaagttgag
aaggcgcatccagacgtctttaacgtattactgcaagtattagatgatggtcgtttgact
gatggtcaaggcagaacggttgattttaaaaatactgtcatcattatgacttcgaacctt
gggtcagatattatccaagagggatttggtcatacgagttatgaagagatgaaagctggg
gtcatgaatgtggtgacacaaagtttccgtcctgagtttttaaaccgtattgatgagtca
gttgtattccatccattagatgaagaaaacatcaaacatattgccagcattcaatttgag
ctcttacgcaaacgtttgcttgaaaaagagttcgatattgaattgtctgatgaggctcta
acgttaatcgcggatgctggatttgatcctgtctatggtgcaaggccattaaaacgagca
ttgcagcaagaagttgaaaatccgttagcccaaaaattactccgtggcgaattgctgccg
ggtaaaatgattaaagtcgtagtgaaagagggaaaattagcattcattcaataa
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