Shewanella sp. H8: ABIS04_15880
Help
Entry
ABIS04_15880 CDS
T10623
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sheh Shewanella sp. H8
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sheh03012
]
ABIS04_15880
Translation factors [BR:
sheh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
ABIS04_15880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
MMR_HSR1
RsgA_GTPase
AAA_29
MeaB
AAA_23
AAA_22
AAA_16
ATP-synt_ab
ABC_tran_CTD
CCDC138_cc
Motif
Other DBs
NCBI-ProteinID:
XBJ47926
LinkDB
All DBs
Position
3681796..3683706
Genome browser
AA seq
636 aa
AA seq
DB search
MINISQAQLIRGSKTLLDETSLTIYPGHKVGLVGANGTGKSSLLALILGHLHLDKGEFSF
PAGWQVASVAQETPALDVSALEYVIDGDIEYRQLEAELDKAQTDNNGNAIALIHGKIDAI
GGYAIHARAGALLAGLGFKDVDQRNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDTMYWLEGWIKSYQGTLILISHDRDFIDGIVGEIVHVENHKLNYYKGNYSSFERVRAE
RMAQQQVAFERQQKERSHMQSFVDRFRYKASKAKQAQSRLKALERMAELLPSQVDNPFQM
AFRKPEALPNPLIVMENVSIGYEDKIILKQVELNLVPGARIGLLGRNGAGKSTLIKLLSG
QLQAKTGKYQPNPGLNIGYFAQHQVEFLSLDDTPMQHLVRLAPPNASEQELRSFLGGFGF
NGDMALSPVRPFSGGEKARLVLALVVWQRPNLLLLDEPTNHLDLEMRHALTMALQSFEGA
MVIVSHDRHLLRLSCSDYYLVDQGAVTPFDGDLDDYHQWLLDAAKLAQANNKTDTATSGN
TVDKKQQKRMAAELRQQVSPLKKQQIKLETQQQKISKRLAELEIELADGSLYEAENKAKM
TNVLNERTTLTQSMDESEMNWLEIQEQIEVIEQDFQ
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacattagccaagctcagttaattcgcggcagtaaaaccttactcgatgaaacc
tcactgacgatttatcccggacataaggttggccttgttggggccaatggtaccggtaaa
tcatcactgcttgccttgattttgggtcatttgcatcttgataaaggtgaattcagcttc
cctgcaggttggcaagttgcctcagtagctcaagaaacaccagcgttagatgtctccgca
ttagaatacgttattgatggcgatattgaataccgtcaacttgaagccgagttagacaaa
gctcaaaccgataataacggtaatgccattgcacttattcatggcaaaattgatgctatt
ggcggttatgccattcacgctcgagcaggcgcgttattagccggcctagggtttaaggat
gtagaccaacgcaatccagtcaaaagcttctctgggggctggcgaatgcgcctcaactta
gcccaagccttgttatgccgctccgatctattattactcgatgagccaaccaaccactta
gacttagatactatgtattggctagaaggttggataaaatcttatcaaggtacgcttatt
ttaattagtcacgatcgtgactttattgatggcattgtcggtgaaattgttcatgtcgaa
aatcacaaattaaattattacaaaggcaattactcttcttttgaacgtgtgcgtgcagaa
cgtatggcacaacaacaagtggcctttgagcgccaacagaaagaacgttcacatatgcag
tcatttgttgatcgttttcgctataaagccagtaaagctaaacaagcacaaagccgctta
aaagccctcgaacgcatggctgagttattgccatcacaagtagacaatccatttcaaatg
gcctttaggaaacctgaagccttaccaaatccactaatagtgatggaaaatgtctctatt
ggttatgaagataaaatcatcctcaaacaagttgagttaaatctggttccaggcgcgcga
atcggtctattgggcagaaacggtgcgggtaaatcgacacttattaaactgttatcaggt
caattacaggccaaaacgggtaaataccaacctaacccagggttaaacattggttatttt
gctcagcaccaagttgaatttttaagtcttgatgataccccaatgcaacacttggtcaga
cttgcgccgcctaatgctagcgagcaagaattacgtagctttttaggtggatttggcttt
aatggtgatatggctttgtcgcccgtacgacctttttctggcggcgaaaaagcccgccta
gtattagcattagtcgtttggcagcgccctaacctattgttactcgatgaacccaccaac
catttagatttagaaatgcgccacgcgctcactatggcattgcaaagctttgaaggcgca
atggttattgtgtcccatgaccgtcacttattacgcttaagttgtagtgactattactta
gtcgatcaaggcgctgtgacaccttttgacggcgacttagatgattatcatcaatggttg
ctagatgccgcaaaattggcccaagccaacaataaaacggatacagccaccagcggtaac
acggttgataaaaagcagcaaaaaagaatggccgctgaactacgccaacaagtttcacct
ctgaaaaaacaacaaataaagttagagacccaacaacagaaaattagtaaaagattagcc
gaattagaaattgaattagccgatggcagcttatacgaagcagaaaacaaggctaaaatg
actaatgttctcaacgaacgcaccacgctgacgcaaagcatggatgaaagcgaaatgaat
tggttagagattcaagagcagattgaagttattgaacaggattttcaataa
DBGET
integrated database retrieval system
