Shewanella sp. H8: ABIS04_15920
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Entry
ABIS04_15920 CDS
T10623
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sheh Shewanella sp. H8
Pathway
sheh02020
Two-component system
sheh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABIS04_15920 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ABIS04_15920 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sheh03000
]
ABIS04_15920 (crp)
Transcription factors [BR:
sheh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
ABIS04_15920 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
RepL
HTH_28
HTH_24
HTH_23
MarR
HTH_ParB
MarR_2
Sigma70_r4
HTH_11
bAvd
GntR
HTH_7
TrmB
HAV_VP
Motif
Other DBs
NCBI-ProteinID:
XBJ47933
LinkDB
All DBs
Position
3690426..3691061
Genome browser
AA seq
211 aa
AA seq
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MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQSERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLSA
QMAYRLHSTSQKVGDLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctctgattggtaagccaaaacctgacccaacattagaatggtttctttcacattgt
cacattcataagtacccagcaaaaagcacgttaattcacgctggcgaagattctgatact
ttatattatatcgttaaaggttcggtcgcagtattgatcaaagatgaagaaggtaaagaa
atgatcctttcttatctgaatcaaggcgactttatcggtgagcttggattatttgaagag
caatctgaacgtaccgcttgggttcgtgctaagcaagcatgtgaaattgcagaaatttct
tataagaagtttaagcaactcattcaggtaaatcctgagatcctgatgaaactttcggcg
caaatggcctatcgtttacacagtactagccaaaaagtaggcgacttagcgtttcttgat
gtcgctggccgtattgcacaaacgctattacaccttgccaaacaaccagatgcgatgaca
catcctgacggcatgcaaattaagatcactcgtcaagagattggtcaaattgtcggttgt
tcacgtgaaactgttggccgtattttgaaaatgcttgaagaacagaatttgatccaagca
cacggtaaaacaatagtggtttacggcacacgctaa
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