Shewanella sp. H8: ABIS04_16445
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Entry
ABIS04_16445 CDS
T10623
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sheh Shewanella sp. H8
Pathway
sheh00470
D-Amino acid metabolism
sheh01100
Metabolic pathways
sheh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sheh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABIS04_16445 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ABIS04_16445 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
ABIS04_16445 (alr)
Enzymes [BR:
sheh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
ABIS04_16445 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sheh01011
]
Precursor biosynthesis
Racemase
ABIS04_16445 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
XBJ48029
LinkDB
All DBs
Position
complement(3784742..3785860)
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AA seq
372 aa
AA seq
DB search
MKPFPRAEISRSALQSNLVQLRLIAPNSKVMAVVKANGYGHGLLNVAESVGLLNASETVG
MHSGSADGFGLARLEEALQLRDGGVKGKLLLLEGFFRQSDLPTLVSHNIDTVVHHESQLQ
MLETIKLEKPVTVWIKIDTGMHRIGFTLDQFDSIYQRLLVCPQVAKPIHLMTHFACADEP
DNSLTQTQMDAFEQRIKGLEGDRTLANSAGTLFWPSSQADWIRPGIALYGVSPVVGDRGV
NHRLIPAMELVSNLIAVREHKAGDSVGYGAFWTAKQDTRLGVVAIGYGDGYPRNAPEGTP
VWINGRRVPIVGRISMDMLTVDLGANAADKVGDNVQLWGKALAVEEVAEYIGTIAYELVT
KLTPRVVVELLE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccttttcctcgcgcagaaataagtcgttctgccttacaaagtaatttagtgcaa
ttacgtcttattgctcctaatagcaaagttatggcggttgttaaagctaatggttatggc
catgggttattgaatgttgctgaaagtgttgggttattaaatgcctctgaaacggttggc
atgcacagtggtagcgccgatggttttggattagcacggcttgaagaggcattacaactt
agagacggcggggtaaaaggtaagcttttattattagaggggttcttccgtcagtcggac
ttaccgacactggttagtcataatattgatactgtagttcatcatgagtcacaactgcag
atgcttgaaaccataaagcttgagaagccagtaaccgtatggataaaaatcgatacgggt
atgcatcgtatcggctttaccttggatcagtttgacagtatttatcagcgtttattggtc
tgtccgcaagtggctaaaccgattcatttaatgacccattttgcctgtgctgacgaaccc
gataatagccttactcaaacgcaaatggacgcctttgagcaacggattaaaggcttagaa
ggggatcgcaccttagctaattctgccgggacattattttggccatcaagccaagctgat
tggataagacccggtattgcgctttatggtgtatctccggttgtaggtgatagaggtgtt
aatcaccgattaattccagcaatggagttagtgtctaatttaattgctgtacgtgagcac
aaagccggtgatagtgtcggctacggcgctttctggaccgcgaaacaagacactcggtta
ggcgtcgtggccattggttatggtgatggttatccacgcaatgcaccagaaggcaccccc
gtgtggattaacggtcgccgtgtgccaatagtgggtcgaatatcgatggatatgttaacg
gtcgacttaggtgccaatgcagcagacaaagtaggggataatgttcagttatggggtaaa
gctctcgcagtagaagaagtagccgaatatattggcactattgcttatgagttagtgact
aaattaacccctcgtgtggtggttgagctgcttgagtaa
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